MTR_4g008070 (Medicago truncatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 MTR_4g008070 T194200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.819 0.829
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.819 0.829
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.819 0.829
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.819 0.771
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH28604 GATA 45 81

Links

Other GATA family TFs
Other Medicago truncatula TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA08G23720 Glycine max GLYMA08G23720 I 0.835
GSMUA_Achr9G13870_001 Musa acuminata GSMUA_Achr9G13870_001 I 0.835
POPTR_0010s25810 Populus trichocarpa POPTR_0010s25810 I 0.835
TCM_027858 Theobroma cacao TCM_027858 I 0.835
VIT_09s0054g00440 Vitis vinifera VIT_09s0054g00440 I 0.835
Ca_17522 Cicer arietinum Ca_17522 I 0.835
Cagra.2346s0015 Capsella grandiflora Cagra.2346s0015 I 0.835
Carubv10009866m.g Capsella rubella Carubv10009866m.g I 0.835
Ciclev10027306m.g Citrus clementina Ciclev10027306m.g I 0.835
Eucgr.J03166 Eucalyptus grandis Eucgr.J03166 I 0.835
evm.TU.supercontig_155.28 Carica papaya evm.TU.supercontig_155.28 I 0.835
orange1.1g022728m.g Citrus sinensis orange1.1g022728m.g I 0.835
SapurV1A.0036s1170 Salix purpurea SapurV1A.0036s1170 I 0.835
Thhalv10020970m.g Eutrema salsugineum Thhalv10020970m.g I 0.835
Bo1g108240 Brassica oleracea Bo1g108240 I 0.830
Bo3g181450 Brassica oleracea Bo3g181450 I 0.830
Bo5g103560 Brassica oleracea Bo5g103560 I 0.830
Bra014292 Brassica rapa Bra014292 I 0.830
Bra023900 Brassica rapa Bra023900 I 0.830
Bra031258 Brassica rapa Bra031258 I 0.830
Bostr.26675s0048 Boechera stricta Bostr.26675s0048 I 0.830
Cagra.1757s0004 Capsella grandiflora Cagra.1757s0004 I 0.830
Carubv10016131m.g Capsella rubella Carubv10016131m.g I 0.830
Thhalv10011695m.g Eutrema salsugineum Thhalv10011695m.g I 0.830
MLOC_17061 Hordeum vulgare MLOC_17061 I 0.825
Traes_7AL_EA6F4FFDE Triticum aestivum Traes_7AL_EA6F4FFDE I 0.825
Traes_7DL_A5ECEDA95 Triticum aestivum Traes_7DL_A5ECEDA95 I 0.825
TRIUR3_11107 Triticum urartu TRIUR3_11107 I 0.825
BGIOSGA007539 Oryza indica BGIOSGA007539 I 0.824
ZML1 Arabidopsis lyrata fgenesh2_kg.3__2338__AT3G21175.1 I 0.824
LPERR02G03330 Leersia perrieri LPERR02G03330 I 0.824
LPERR06G21800 Leersia perrieri LPERR06G21800 I 0.824
OB06G33840 Oryza brachyantha OB06G33840 I 0.824
OBART02G03780 Oryza barthii OBART02G03780 I 0.824
OGLUM02G03560 Oryza glumaepatula OGLUM02G03560 I 0.824
OMERI02G04610 Oryza meridionalis OMERI02G04610 I 0.824
ONIVA02G03810 Oryza nivara ONIVA02G03810 I 0.824
ORGLA02G0035000 Oryza glaberrima ORGLA02G0035000 I 0.824
ORUFI02G03830 Oryza rufipogon ORUFI02G03830 I 0.824
GATA17 Oryza sativa OS02G0148500 I 0.824
Cla015736 Citrullus lanatus Cla015736 I 0.824
Cucsa.359570 Cucumis sativus Cucsa.359570 I 0.824
Aquca_007_00522 Aquilegia coerulea Aquca_007_00522 I 0.824
PDK_20s1340921g001 Phoenix dactylifera PDK_20s1340921g001 I 0.824
GATA24 Arabidopsis thaliana AT3G21175 D 0.819
GATA28 Arabidopsis thaliana AT1G51600 D 0.819
BGIOSGA020596 Oryza indica BGIOSGA020596 I 0.819
BRADI1G33980 Brachypodium distachyon BRADI1G33980 I 0.819
GRMZM2G080509 Zea mays GRMZM2G080509 I 0.819
GSMUA_Achr3G05620_001 Musa acuminata GSMUA_Achr3G05620_001 I 0.819
OB02G13220 Oryza brachyantha OB02G13220 I 0.819
OBART06G26250 Oryza barthii OBART06G26250 I 0.819
OGLUM06G27650 Oryza glumaepatula OGLUM06G27650 I 0.819
OLONG_015069 Oryza longistaminata OLONG_015069 I 0.819
OMERI06G26410 Oryza meridionalis OMERI06G26410 I 0.819
ONIVA06G28780 Oryza nivara ONIVA06G28780 I 0.819
OPUNC02G02970 Oryza punctata OPUNC02G02970 I 0.819
OPUNC06G23830 Oryza punctata OPUNC06G23830 I 0.819
ORGLA06G0219100 Oryza glaberrima ORGLA06G0219100 I 0.819
ORUFI06G28170 Oryza rufipogon ORUFI06G28170 I 0.819
OS06G0698900 Oryza sativa OS06G0698900 D 0.819
PRUPE_ppa009709mg Prunus persica PRUPE_ppa009709mg I 0.819
ZML2 Arabidopsis lyrata scaffold_104929.1 I 0.819
Si006750m.g Setaria italica Si006750m.g I 0.819
Pm013048 Prunus mume Pm013048 I 0.819
e_gw1.226.30.1 Physcomitrella patens e_gw1.226.30.1 I 0.819
fgenesh1_pm.scaffold_69000012 Physcomitrella patens fgenesh1_pm.scaffold_69000012 I 0.819
fgenesh2_pm.scaffold_111000001 Physcomitrella patens fgenesh2_pm.scaffold_111000001 I 0.819
gw1.68.123.1 Physcomitrella patens gw1.68.123.1 I 0.819
Pavir.Da00166 Panicum virgatum Pavir.Da00166 I 0.819
Pavir.Db00254 Panicum virgatum Pavir.Db00254 I 0.819
PDK_20s1879741g001 Phoenix dactylifera PDK_20s1879741g001 I 0.819
GRMZM2G058479 Zea mays GRMZM2G058479 I 0.815
Sb10g028750 Sorghum bicolor Sb10g028750 I 0.815
SELMODRAFT_177195 Selaginella moellendorffii SELMODRAFT_177195 I 0.815
SELMODRAFT_423855 Selaginella moellendorffii SELMODRAFT_423855 I 0.815
F775_08559 Aegilops tauschii F775_08559 I 0.810
GSMUA_Achr10G06260_001 Musa acuminata GSMUA_Achr10G06260_001 I 0.810
GSMUA_Achr7G08720_001 Musa acuminata GSMUA_Achr7G08720_001 I 0.810
LPERR11G14110 Leersia perrieri LPERR11G14110 I 0.810
MLOC_3107 Hordeum vulgare MLOC_3107 I 0.810
POPTR_0007s03130 Populus trichocarpa POPTR_0007s03130 I 0.810
PRUPE_ppa009401mg Prunus persica PRUPE_ppa009401mg I 0.810
TCM_007360 Theobroma cacao TCM_007360 I 0.810
Traes_6AS_4106E8E28 Triticum aestivum Traes_6AS_4106E8E28 I 0.810
Traes_6BS_AB5909D02 Triticum aestivum Traes_6BS_AB5909D02 I 0.810
Traes_6DS_6268D31AE Triticum aestivum Traes_6DS_6268D31AE I 0.810
TRIUR3_32095 Triticum urartu TRIUR3_32095 I 0.810
Pm022163 Prunus mume Pm022163 I 0.810
29838.m001724 Ricinus communis 29838.m001724 I 0.810
Aquca_018_00034 Aquilegia coerulea Aquca_018_00034 I 0.810
Gorai.008G017800 Gossypium raimondii Gorai.008G017800 I 0.810
SapurV1A.0187s0150 Salix purpurea SapurV1A.0187s0150 I 0.810
GSMUA_Achr2G04520_001 Musa acuminata GSMUA_Achr2G04520_001 I 0.805
Cla013127 Citrullus lanatus Cla013127 I 0.805
cassava12169.valid.m1 Manihot esculenta cassava12169.valid.m1 I 0.805
cassava6876.valid.m1 Manihot esculenta cassava6876.valid.m1 I 0.805
Cucsa.218190 Cucumis sativus Cucsa.218190 I 0.805
mgf016112m Mimulus guttatus mgf016112m I 0.805
Aquca_010_00250 Aquilegia coerulea Aquca_010_00250 I 0.805
PK11000.1 Cannabis sativa PK11000.1 I 0.805
LjSGA_067759.1 Lotus japonicus LjSGA_067759.1 I 0.804