CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LBD14
(
Arabidopsis lyrata
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
fgenesh1_pg.C_scaffold_4001244
T245146_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_4001244
LOB
7
106
PCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFSAIHKVFGASNFSKLISHLPDHDRCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLRE
Links
Other
LOB
family TFs
Other
Arabidopsis lyrata
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.24513s0089
Boechera stricta
Bostr.24513s0089
N
0.990
LBD14
Arabidopsis thaliana
AT2G31310
N
0.990
Cagra.6952s0010
Capsella grandiflora
Cagra.6952s0010
N
0.990
Carubv10025067m.g
Capsella rubella
Carubv10025067m.g
N
0.980
Bra021737
Brassica rapa
Bra021737
N
0.949
Bo4g052270
Brassica oleracea
Bo4g052270
N
0.939
Thhalv10017299m.g
Eutrema salsugineum
Thhalv10017299m.g
N
0.939
Bra018260
Brassica rapa
Bra018260
N
0.808
GLYMA19G34600
Glycine max
GLYMA19G34600
I
0.758
Ca_12214
Cicer arietinum
Ca_12214
I
0.758
OB08G30680
Oryza brachyantha
OB08G30680
I
0.737
Cagra.0686s0036
Capsella grandiflora
Cagra.0686s0036
I
0.737
SapurV1A.0006s0970
Salix purpurea
SapurV1A.0006s0970
I
0.737
Lus10000613.g
Linum usitatissimum
Lus10000613.g
I
0.737
Cla015094
Citrullus lanatus
Cla015094
I
0.737
GLYMA10G04050
Glycine max
GLYMA10G04050
I
0.737
mgf020773m
Mimulus guttatus
mgf020773m
I
0.737
Bostr.20903s0070
Boechera stricta
Bostr.20903s0070
I
0.737
GLYMA13G18210
Glycine max
GLYMA13G18210
I
0.737
evm.TU.supercontig_50.42
Carica papaya
evm.TU.supercontig_50.42
I
0.737
Carubv10019250m.g
Capsella rubella
Carubv10019250m.g
I
0.737
VIT_07s0005g03020
Vitis vinifera
VIT_07s0005g03020
I
0.727
cassava40664.m1
Manihot esculenta
cassava40664.m1
I
0.727
Cucsa.388160
Cucumis sativus
Cucsa.388160
I
0.727
Aquca_034_00400
Aquilegia coerulea
Aquca_034_00400
I
0.727
Cucsa.053450
Cucumis sativus
Cucsa.053450
I
0.727
cassava41632.m1
Manihot esculenta
cassava41632.m1
I
0.727
28428.m000040
Ricinus communis
28428.m000040
I
0.727
Cla006087
Citrullus lanatus
Cla006087
I
0.727
Gorai.007G144500
Gossypium raimondii
Gorai.007G144500
I
0.727
GLYMA03G31860
Glycine max
GLYMA03G31860
I
0.727
LPERR08G20530
Leersia perrieri
LPERR08G20530
I
0.727
Thhalv10006226m.g
Eutrema salsugineum
Thhalv10006226m.g
I
0.727
Bra014581
Brassica rapa
Bra014581
I
0.727
LBD29
Arabidopsis thaliana
AT3G58190
I
0.727
Bo8g092560
Brassica oleracea
Bo8g092560
I
0.727
MTR_1g070205
Medicago truncatula
MTR_1g070205
I
0.727
MTR_7g096610
Medicago truncatula
MTR_7g096610
I
0.727
Ciclev10023341m.g
Citrus clementina
Ciclev10023341m.g
I
0.727
POPTR_0002s04200
Populus trichocarpa
POPTR_0002s04200
I
0.727
PRUPE_ppa025889mg
Prunus persica
PRUPE_ppa025889mg
I
0.727
Gorai.004G073300
Gossypium raimondii
Gorai.004G073300
I
0.727
orange1.1g027399m.g
Citrus sinensis
orange1.1g027399m.g
I
0.727
Lus10033873.g
Linum usitatissimum
Lus10033873.g
I
0.727
Eucgr.B01529
Eucalyptus grandis
Eucgr.B01529
I
0.717
LjT35F15.90.nd
Lotus japonicus
LjT35F15.90.nd
I
0.717
Ca_07763
Cicer arietinum
Ca_07763
I
0.717
OBART08G23860
Oryza barthii
OBART08G23860
I
0.717
OPUNC08G21770
Oryza punctata
OPUNC08G21770
I
0.717
ONIVA09G01330
Oryza nivara
ONIVA09G01330
I
0.717
OMERI08G18670
Oryza meridionalis
OMERI08G18670
I
0.717
OGLUM08G25340
Oryza glumaepatula
OGLUM08G25340
I
0.717
OLONG_010223
Oryza longistaminata
OLONG_010223
I
0.717
LBD29
Arabidopsis lyrata
fgenesh2_kg.5__2263__AT3G58190.1
I
0.717
ORGLA08G0192400
Oryza glaberrima
ORGLA08G0192400
I
0.717
Pm020628
Prunus mume
Pm020628
I
0.717
BGIOSGA026473
Oryza indica
BGIOSGA026473
I
0.717
PGSC0003DMG400009716
Solanum tuberosum
PGSC0003DMG400009716
I
0.717
ORUFI08G26340
Oryza rufipogon
ORUFI08G26340
I
0.717
OS08G0563400
Oryza sativa
OS08G0563400
I
0.717
Bo4g108600
Brassica oleracea
Bo4g108600
I
0.707
Pavir.Fa00011
Panicum virgatum
Pavir.Fa00011
I
0.707
Gorai.004G220000
Gossypium raimondii
Gorai.004G220000
I
0.707
Solyc09g066270.2
Solanum lycopersicum
Solyc09g066270.2
I
0.707
Aquca_017_00693
Aquilegia coerulea
Aquca_017_00693
I
0.707
Si015156m.g
Setaria italica
Si015156m.g
I
0.707
gene08253-v1.0-hybrid
Fragaria vesca
gene08253-v1.0-hybrid
I
0.707
PK23380.1
Cannabis sativa
PK23380.1
I
0.701