CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa022799mg
(
Prunus persica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PRUPE_ppa022799mg
T255938_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ08294
MADS box
10
54
YIANDSTRKATFKKRKRGLIKKISELSTLCDVPACALIYSQYESL
Links
Other
MADS box
family TFs
Other
Prunus persica
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm003258
Prunus mume
Pm003258
N
0.978
evm.TU.contig_38146
Carica papaya
evm.TU.contig_38146
I
0.773
LjSGA_018236.1
Lotus japonicus
LjSGA_018236.1
I
0.744
PRUPE_ppa018168mg
Prunus persica
PRUPE_ppa018168mg
I
0.733
Pm004396
Prunus mume
Pm004396
I
0.733
evm.TU.contig_24608
Carica papaya
evm.TU.contig_24608
I
0.733
MDP0000925348
Malus domestica
MDP0000925348
I
0.733
Ca_06495
Cicer arietinum
Ca_06495
I
0.727
mgf026186m
Mimulus guttatus
mgf026186m
I
0.727
evm.TU.contig_27586
Carica papaya
evm.TU.contig_27586
I
0.727
evm.TU.contig_35009
Carica papaya
evm.TU.contig_35009
I
0.727
evm.TU.contig_43368
Carica papaya
evm.TU.contig_43368
I
0.727
cassava15247.m1
Manihot esculenta
cassava15247.m1
I
0.711
evm.TU.contig_26058.2
Carica papaya
evm.TU.contig_26058.2
I
0.711
evm.TU.supercontig_265.6
Carica papaya
evm.TU.supercontig_265.6
N
0.711
evm.TU.supercontig_34.40
Carica papaya
evm.TU.supercontig_34.40
N
0.711
LjSGA_147985.1
Lotus japonicus
LjSGA_147985.1
I
0.704
evm.TU.contig_28448.1
Carica papaya
evm.TU.contig_28448.1
N
0.702
evm.TU.supercontig_358.1
Carica papaya
evm.TU.supercontig_358.1
N
0.702
Gorai.004G292000
Gossypium raimondii
Gorai.004G292000
I
0.702