Pm003258 (Prunus mume)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pm003258 T257026_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm003258 MADS box 10 54

Links

Other MADS box family TFs
Other Prunus mume TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa022799mg Prunus persica PRUPE_ppa022799mg N 0.978
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I 0.773
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.756
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I 0.756
Ca_06495 Cicer arietinum Ca_06495 I 0.733
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I 0.733
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.727
Bo9g078450 Brassica oleracea Bo9g078450 I 0.711
Bra029469 Brassica rapa Bra029469 I 0.711
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.711
Cla005226 Citrullus lanatus Cla005226 I 0.711
Pm004396 Prunus mume Pm004396 I 0.711
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.711
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I 0.711
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.711
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N 0.711
evm.TU.supercontig_358.1 Carica papaya evm.TU.supercontig_358.1 N 0.711
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.711
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.711
MDP0000925348 Malus domestica MDP0000925348 I 0.711
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.711
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.711
mgf026186m Mimulus guttatus mgf026186m I 0.705