Eucgr.J01940 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.J01940 T286954_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.730 0.819
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.730 0.819
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.717 0.819
AT5G58900
M07146_2.00 		Arabidopsis thaliana
HHWWYCTTATCYWHW
WDWRGATAAGRWWDD		 Dap-seq
OMalley et al.(2016)
At5g58900_col_a 		0.704 0.819
AT5G58900
M07147_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWWH
DWWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a 		0.704 0.819
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.J01940.1 Myb 134 181

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_041672 Theobroma cacao TCM_041672 I 0.775
29681.m001296 Ricinus communis 29681.m001296 I 0.775
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I 0.764
Gorai.009G093700 Gossypium raimondii Gorai.009G093700 I 0.758
GLYMA11G22960 Glycine max GLYMA11G22960 I 0.757
GLYMA18G07250 Glycine max GLYMA18G07250 I 0.757
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I 0.746
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I 0.745
gene07984-v1.0-hybrid Fragaria vesca gene07984-v1.0-hybrid I 0.745
GLYMA14G37050 Glycine max GLYMA14G37050 I 0.740
MTR_3g462790 Medicago truncatula MTR_3g462790 I 0.739
Ciclev10028910m.g Citrus clementina Ciclev10028910m.g I 0.737
orange1.1g021816m.g Citrus sinensis orange1.1g021816m.g I 0.737
SapurV1A.0041s0720 Salix purpurea SapurV1A.0041s0720 I 0.736
SapurV1A.0164s0380 Salix purpurea SapurV1A.0164s0380 I 0.736
MDP0000243328 Malus domestica MDP0000243328 I 0.733
MDP0000255630 Malus domestica MDP0000255630 I 0.733
MDP0000292581 Malus domestica MDP0000292581 I 0.733
PK27213.1 Cannabis sativa PK27213.1 D 0.730
Pm000529 Prunus mume Pm000529 I 0.726
VIT_06s0004g06100 Vitis vinifera VIT_06s0004g06100 I 0.725
MTR_5g069710 Medicago truncatula MTR_5g069710 I 0.724
GLYMA02G39000 Glycine max GLYMA02G39000 I 0.723
Ca_15603 Cicer arietinum Ca_15603 I 0.723
mgf022442m Mimulus guttatus mgf022442m I 0.722
PRUPE_ppa009072mg Prunus persica PRUPE_ppa009072mg I 0.717
Ciclev10012285m.g Citrus clementina Ciclev10012285m.g I 0.717
orange1.1g021756m.g Citrus sinensis orange1.1g021756m.g I 0.717
PK27693.1 Cannabis sativa PK27693.1 D 0.717
Bo3g018460 Brassica oleracea Bo3g018460 I 0.714
Bra006741 Brassica rapa Bra006741 I 0.714
Ca_14247 Cicer arietinum Ca_14247 I 0.713
POPTR_0009s04730 Populus trichocarpa POPTR_0009s04730 I 0.711
TCM_021750 Theobroma cacao TCM_021750 I 0.708
Gorai.006G180900 Gossypium raimondii Gorai.006G180900 I 0.707
Cla013553 Citrullus lanatus Cla013553 I 0.706
Cucsa.139090 Cucumis sativus Cucsa.139090 I 0.706
AT5G58900 Arabidopsis thaliana AT5G58900 D 0.704
fgenesh2_kg.8__1829__AT5G58900.1 Arabidopsis lyrata fgenesh2_kg.8__1829__AT5G58900.1 I 0.704
Bostr.26833s0356 Boechera stricta Bostr.26833s0356 I 0.704
Cagra.0891s0087 Capsella grandiflora Cagra.0891s0087 I 0.704
Carubv10026903m.g Capsella rubella Carubv10026903m.g I 0.704
VIT_08s0007g01920 Vitis vinifera VIT_08s0007g01920 I 0.703
Thhalv10014270m.g Eutrema salsugineum Thhalv10014270m.g I 0.702
cassava23290.valid.m1 Manihot esculenta cassava23290.valid.m1 I 0.701
Cla018243 Citrullus lanatus Cla018243 I 0.698
PGSC0003DMG400030348 Solanum tuberosum PGSC0003DMG400030348 I 0.693
Solyc06g076770.2 Solanum lycopersicum Solyc06g076770.2 I 0.693
Aquca_009_00736 Aquilegia coerulea Aquca_009_00736 I 0.693
Bra002610 Brassica rapa Bra002610 I 0.691
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I 0.691
Cucsa.176140 Cucumis sativus Cucsa.176140 I 0.689
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I 0.687
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I 0.687
Lus10018209.g Linum usitatissimum Lus10018209.g I 0.687
Lus10040696.g Linum usitatissimum Lus10040696.g I 0.687
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I 0.686
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I 0.682
28288.m000014 Ricinus communis 28288.m000014 I 0.678
GLYMA01G27720 Glycine max GLYMA01G27720 I 0.676
GLYMA03G14440 Glycine max GLYMA03G14440 I 0.676
GSMUA_Achr10G02290_001 Musa acuminata GSMUA_Achr10G02290_001 I 0.675
Aquca_004_00289 Aquilegia coerulea Aquca_004_00289 I 0.674
POPTR_0006s09860 Populus trichocarpa POPTR_0006s09860 I 0.673
Eucgr.B02800 Eucalyptus grandis Eucgr.B02800 I 0.672
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.672
Pavir.J16113 Panicum virgatum Pavir.J16113 I 0.672
MTR_7g067080 Medicago truncatula MTR_7g067080 I 0.670
Ca_19327 Cicer arietinum Ca_19327 I 0.670
Cucsa.164580 Cucumis sativus Cucsa.164580 I 0.669
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I 0.667
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I 0.667
PGSC0003DMG400019129 Solanum tuberosum PGSC0003DMG400019129 I 0.666
POPTR_0008s06450 Populus trichocarpa POPTR_0008s06450 I 0.664
SapurV1A.0001s0790 Salix purpurea SapurV1A.0001s0790 I 0.663
cassava30173.valid.m1 Manihot esculenta cassava30173.valid.m1 I 0.661