Pm016138 (Prunus mume)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Pm016138 T323208_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.925 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm016138 SBP 115 189

Links

Other SBP family TFs
Other Prunus mume TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa007202mg Prunus persica PRUPE_ppa007202mg I 0.980
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.979
30147.m014478 Ricinus communis 30147.m014478 I 0.969
MDP0000142582 Malus domestica MDP0000142582 N 0.968
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.953
Cla004156 Citrullus lanatus Cla004156 I 0.950
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.950
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.950
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.949
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.948
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.948
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.948
Ca_05711 Cicer arietinum Ca_05711 I 0.948
Cla002666 Citrullus lanatus Cla002666 I 0.948
Pm024528 Prunus mume Pm024528 I 0.948
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.948
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.948
MDP0000170630 Malus domestica MDP0000170630 N 0.947
PK02140.1 Cannabis sativa PK02140.1 I 0.947
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.946
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.946
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.946
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.944
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.944
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.944
Ca_01426 Cicer arietinum Ca_01426 I 0.944
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.944
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.944
PK14243.1 Cannabis sativa PK14243.1 N 0.942
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.941
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.940
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.937
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.934
MDP0000176265 Malus domestica MDP0000176265 I 0.934
TCM_014668 Theobroma cacao TCM_014668 I 0.933
Cla019579 Citrullus lanatus Cla019579 I 0.933
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.933
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.932
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.932
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.932
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.932
TCM_008671 Theobroma cacao TCM_008671 I 0.931
29929.m004627 Ricinus communis 29929.m004627 I 0.931
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.931
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.931
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.930
SELMODRAFT_28634 Selaginella moellendorffii SELMODRAFT_28634 N 0.930
SELMODRAFT_28635 Selaginella moellendorffii SELMODRAFT_28635 N 0.930
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.930
Si026656m.g Setaria italica Si026656m.g I 0.928
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.928
Bo9g097630 Brassica oleracea Bo9g097630 I 0.927
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.927
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.926
Cla001541 Citrullus lanatus Cla001541 I 0.926
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.926
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.926
SPL13A Arabidopsis thaliana AT5G50570 I 0.925
SPL13A Arabidopsis thaliana AT5G50670 D 0.925
Bo3g024180 Brassica oleracea Bo3g024180 I 0.925
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.925
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.925
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.925
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.925
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.924
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.924
Bra022766 Brassica rapa Bra022766 I 0.923
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.922
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.921
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.921
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.921
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.921
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.921
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.921
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.921
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.920
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.920
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.920
PK19500.1 Cannabis sativa PK19500.1 I 0.920
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.919
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.919
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.918
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.916
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.915
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.914
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.912
SapurV1A.0329s0040 Salix purpurea SapurV1A.0329s0040 I 0.911
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.910
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.910
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.909
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.909
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.908
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.908
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.907
OS01G0922600 Oryza sativa OS01G0922600 I 0.907
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.904
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.902
OBART01G42150 Oryza barthii OBART01G42150 I 0.898
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.898
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.898
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.897
Ca_24733 Cicer arietinum Ca_24733 I 0.895
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.894
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.892
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.892
MDP0000263766 Malus domestica MDP0000263766 I 0.891
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.890
Bo3g042890 Brassica oleracea Bo3g042890 I 0.887
PK17790.1 Cannabis sativa PK17790.1 I 0.886