Thhalv10029232m.g (Eutrema salsugineum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Thhalv10029232m.g T357054_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.851 0.780
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.835 0.644
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.831 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10029232m WRKY 104 164

Links

Other WRKY family TFs
Other Eutrema salsugineum TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g095820 Brassica oleracea Bo2g095820 I 0.882
Bra008459 Brassica rapa Bra008459 I 0.882
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.880
Bra008454 Brassica rapa Bra008454 I 0.870
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.861
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.860
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.858
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.856
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.856
Bra008456 Brassica rapa Bra008456 I 0.855
WRKY67 Arabidopsis thaliana AT1G66550 I 0.854
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.853
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.853
WRKY64 Arabidopsis thaliana AT1G66560 I 0.851
WRKY63 Arabidopsis thaliana AT1G66600 D 0.851
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.849
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.849
WRKY66 Arabidopsis thaliana AT1G80590 I 0.847
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.847
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.845
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.845
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.845
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.841
Bra028918 Brassica rapa Bra028918 I 0.840
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.840
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.835
WRKY62 Arabidopsis thaliana AT5G01900 D 0.835
Bo5g068250 Brassica oleracea Bo5g068250 I 0.834
Bra023211 Brassica rapa Bra023211 I 0.834
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.834
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.832
WRKY38 Arabidopsis thaliana AT5G22570 D 0.831
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.831
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.827
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.824
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.821
OB05G27830 Oryza brachyantha OB05G27830 I 0.819
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.817
Bra020196 Brassica rapa Bra020196 I 0.816
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.816
Bo2g024040 Brassica oleracea Bo2g024040 I 0.815
Bra020197 Brassica rapa Bra020197 I 0.815
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.815
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.814
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.814
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.814
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.814
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.814
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.814
OS05G0478400 Oryza sativa OS05G0478400 I 0.814
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.813
Traes_3DS_9A02CF31D Triticum aestivum Traes_3DS_9A02CF31D I 0.813
OBART05G20340 Oryza barthii OBART05G20340 I 0.812
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.812
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.812
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.812
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.812
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.811
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.811
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.810
Bo01002s040 Brassica oleracea Bo01002s040 I 0.810
Bra002421 Brassica rapa Bra002421 I 0.810
OB05G17240 Oryza brachyantha OB05G17240 I 0.810
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.810
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.810
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.810
OS05G0478800 Oryza sativa OS05G0478800 I 0.810
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.809
MDP0000828055 Malus domestica MDP0000828055 I 0.809