MTR_5g082950 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_5g082950 T002897_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.779 0.880
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.779 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES99624 AP2 64 115

Links

Other AP2 family TFs
Other Medicago truncatula TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava20838.m1 Manihot esculenta cassava20838.m1 I 0.814
MDP0000628484 Malus domestica MDP0000628484 I 0.814
Cla006708 Citrullus lanatus Cla006708 I 0.814
chr2.CM0002.60.nc Lotus japonicus chr2.CM0002.60.nc I 0.814
Lus10009834.g Linum usitatissimum Lus10009834.g I 0.808
Ca_12465 Cicer arietinum Ca_12465 I 0.808
Lus10040944.g Linum usitatissimum Lus10040944.g I 0.808
GSMUA_Achr5G07400_001 Musa acuminata GSMUA_Achr5G07400_001 I 0.806
SapurV1A.0650s0090 Salix purpurea SapurV1A.0650s0090 I 0.806
Pm018953 Prunus mume Pm018953 I 0.804
PRUPE_ppa015230mg Prunus persica PRUPE_ppa015230mg I 0.804
POPTR_0008s07120 Populus trichocarpa POPTR_0008s07120 I 0.804
PGSC0003DMG400041883 Solanum tuberosum PGSC0003DMG400041883 I 0.804
29814.m000739 Ricinus communis 29814.m000739 I 0.804
cassava41265.m1 Manihot esculenta cassava41265.m1 I 0.804
SapurV1A.0061s0480 Salix purpurea SapurV1A.0061s0480 I 0.804
orange1.1g038194m.g Citrus sinensis orange1.1g038194m.g I 0.804
gene21003-v1.0-hybrid Fragaria vesca gene21003-v1.0-hybrid I 0.804
PGSC0003DMG400034739 Solanum tuberosum PGSC0003DMG400034739 I 0.804
Ciclev10033578m.g Citrus clementina Ciclev10033578m.g I 0.804
MDP0000225376 Malus domestica MDP0000225376 I 0.804
TCM_042471 Theobroma cacao TCM_042471 I 0.804
GSMUA_Achr3G10100_001 Musa acuminata GSMUA_Achr3G10100_001 I 0.804
GSMUA_Achr9G18060_001 Musa acuminata GSMUA_Achr9G18060_001 I 0.804
GLYMA14G06290 Glycine max GLYMA14G06290 I 0.804
GLYMA02G43240 Glycine max GLYMA02G43240 I 0.804
mgf024416m Mimulus guttatus mgf024416m I 0.801
ABI4 Vitis vinifera VIT_13s0067g01400 I 0.795
POPTR_0010s19370 Populus trichocarpa POPTR_0010s19370 I 0.791
Bo4g025410 Brassica oleracea Bo4g025410 I 0.791
Thhalv10017614m.g Eutrema salsugineum Thhalv10017614m.g I 0.791
Bra000178 Brassica rapa Bra000178 I 0.791
Bra004978 Brassica rapa Bra004978 I 0.791
Bo3g034810 Brassica oleracea Bo3g034810 I 0.791
Cagra.7053s0005 Capsella grandiflora Cagra.7053s0005 I 0.789
Carubv10025253m.g Capsella rubella Carubv10025253m.g I 0.789
Bostr.23794s0036 Boechera stricta Bostr.23794s0036 I 0.789
ABI4 Arabidopsis lyrata Al_scaffold_0004_2621 I 0.789
ABI4 Arabidopsis thaliana AT2G40220 I 0.789
Pavir.J29572 Panicum virgatum Pavir.J29572 I 0.779
Sb09g016550 Sorghum bicolor Sb09g016550 I 0.779
Pavir.J33237 Panicum virgatum Pavir.J33237 I 0.779
Pavir.J38620 Panicum virgatum Pavir.J38620 I 0.779
ORGLA05G0109500 Oryza glaberrima ORGLA05G0109500 I 0.779
OPUNC05G11000 Oryza punctata OPUNC05G11000 I 0.779
ONIVA05G13490 Oryza nivara ONIVA05G13490 I 0.779
abi4 Zea mays GRMZM2G093595 D 0.779
OGLUM05G13600 Oryza glumaepatula OGLUM05G13600 I 0.779
ABI4 Oryza sativa OS05G0351200 I 0.779
OMERI05G11540 Oryza meridionalis OMERI05G11540 I 0.779
BGIOSGA018232 Oryza indica BGIOSGA018232 I 0.779
LPERR05G10140 Leersia perrieri LPERR05G10140 I 0.779
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.763
Gorai.011G291900 Gossypium raimondii Gorai.011G291900 I 0.743
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.738
SELMODRAFT_427925 Selaginella moellendorffii SELMODRAFT_427925 I 0.715
SELMODRAFT_420500 Selaginella moellendorffii SELMODRAFT_420500 I 0.715