CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr9G21470_001
(
Musa acuminata
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
GSMUA_Achr9G21470_001
T010456_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr9P21470_001
AP2
69
118
SRYKGAVPQPNGRWGAQIYEKHQRVWLGTFNTEAEAARAYDVAVRRFRGR
GSMUA_Achr9P21470_001
B3
160
255
HELQQSRRSFGADKMKTAPSRGAAAGGGPSNGMLLNFEDACGRVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLEAGDVVSFQRSTGPEKQLFIDSK
Links
Other
AP2,B3
family TFs
Other
Musa acuminata
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr4G03670_001
Musa acuminata
GSMUA_Achr4G03670_001
N
0.791
GSMUA_Achr5G09950_001
Musa acuminata
GSMUA_Achr5G09950_001
I
0.741
GSMUA_Achr4G06710_001
Musa acuminata
GSMUA_Achr4G06710_001
I
0.727
PGSC0003DMG400000811
Solanum tuberosum
PGSC0003DMG400000811
I
0.719
MDP0000128924
Malus domestica
MDP0000128924
I
0.719
Pm029015
Prunus mume
Pm029015
I
0.712
Gorai.008G185900
Gossypium raimondii
Gorai.008G185900
I
0.712
TCM_011862
Theobroma cacao
TCM_011862
I
0.712
gene03871-v1.0-hybrid
Fragaria vesca
gene03871-v1.0-hybrid
I
0.712
cassava43329.valid.m1
Manihot esculenta
cassava43329.valid.m1
I
0.712
PRUPE_ppa006243mg
Prunus persica
PRUPE_ppa006243mg
I
0.712
Solyc05g009790.1
Solanum lycopersicum
Solyc05g009790.1
I
0.712
Gorai.013G080000
Gossypium raimondii
Gorai.013G080000
I
0.705
MTR_5g053920
Medicago truncatula
MTR_5g053920
I
0.705
OGLUM05G26380
Oryza glumaepatula
OGLUM05G26380
I
0.705
mgf019592m
Mimulus guttatus
mgf019592m
I
0.705
OS05G0549800
Oryza sativa
OS05G0549800
I
0.705
OPUNC05G22370
Oryza punctata
OPUNC05G22370
I
0.705
OMERI05G22110
Oryza meridionalis
OMERI05G22110
I
0.705