Pm029015 (Prunus mume)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2)
PF02362 (B3) 		IPR001471
IPR003340 		Pm029015 T010551_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M06692_2.00 		Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN
NNHHMDDDWDDWWTHTGTTGN		 Dap-seq
OMalley et al.(2016)
RAV1_colamp_a 		0.873 0.873
RAV1
M06693_2.00 		Arabidopsis thaliana
VCAACADAWWHHAYNHB
VDNRTDDWWTHTGTTGB		 Dap-seq
OMalley et al.(2016)
RAV1_col 		0.873 0.873
RAV1
M02649_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 SELEX
Mathelier et al.(2014)
MA0582.1 		0.873 0.873
RAV1
M02650_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 SELEX
Mathelier et al.(2014)
MA0583.1 		0.873 0.873
RAV1
M09748_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 Transfac
Matys et al.(2006)
P$RAV1_01 		0.873 0.873
RAV1
M09749_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 Transfac
Matys et al.(2006)
P$RAV1_02 		0.873 0.873
ARF14
M01648_2.00 		Arabidopsis thaliana
RCAACAKA
TMTGTTGY		 PBM
Weirauch et al.(2014)
pTH8727 		0.800 0.800
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm029015 AP2 79 128
Pm029015 B3 217 334

Links

Other AP2,B3 family TFs
Other Prunus mume TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 1.000
MDP0000939633 Malus domestica MDP0000939633 I 0.960
MDP0000128924 Malus domestica MDP0000128924 I 0.947
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.947
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.927
TCM_011862 Theobroma cacao TCM_011862 I 0.927
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.920
29738.m001050 Ricinus communis 29738.m001050 I 0.913
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.907
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.907
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.907
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.907
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.900
PK15652.1 Cannabis sativa PK15652.1 I 0.900
Ca_24123 Cicer arietinum Ca_24123 I 0.900
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.900
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.900
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.899
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.899
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.893
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.893
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.893
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.893
Cla020675 Citrullus lanatus Cla020675 I 0.893
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.893
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.893
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.887
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.880
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.880
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.880
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.880
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.880
mgf019592m Mimulus guttatus mgf019592m I 0.880
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.879
RAV1 Arabidopsis thaliana AT1G13260 D 0.873
Bra019821 Brassica rapa Bra019821 I 0.873
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.873
Bo5g015210 Brassica oleracea Bo5g015210 I 0.873
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.867
Bra026917 Brassica rapa Bra026917 I 0.867
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.867
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.867
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.860
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.860
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.860
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.860
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.853
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.853
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.853
Ca_08436 Cicer arietinum Ca_08436 I 0.853
RAV2 Arabidopsis thaliana AT1G68840 D 0.853
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.847
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.847
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.847
Bra024735 Brassica rapa Bra024735 I 0.846
Bo5g043120 Brassica oleracea Bo5g043120 I 0.846
Bo3g138550 Brassica oleracea Bo3g138550 I 0.840
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.840
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.840
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.833
Si024576m.g Setaria italica Si024576m.g I 0.829
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.829
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.829
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I 0.827
Bra038346 Brassica rapa Bra038346 I 0.827
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.823
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.820
OS05G0549800 Oryza sativa OS05G0549800 I 0.820
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.820
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.820
Bo2g061320 Brassica oleracea Bo2g061320 I 0.820
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.820
Bra011002 Brassica rapa Bra011002 I 0.820
Cla000872 Citrullus lanatus Cla000872 I 0.819
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.819
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.819
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.819
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.819
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.819
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.818
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.816
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.813
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.812
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.810
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.808
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.808
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.808
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.808
OS01G0693400 Oryza sativa OS01G0693400 I 0.808
OBART01G27360 Oryza barthii OBART01G27360 I 0.808
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I 0.808
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.808
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.808
Bo2g138650 Brassica oleracea Bo2g138650 I 0.807
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.805
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I 0.800
ARF14 Arabidopsis thaliana AT3G25730 D 0.800
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.799
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.799
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.799
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.796
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.793
Bra026509 Brassica rapa Bra026509 I 0.793
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.786
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.785
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.785
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.784
Si004045m.g Setaria italica Si004045m.g I 0.784
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.782
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.780
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.780
OB01G12600 Oryza brachyantha OB01G12600 I 0.777
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.776
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.776
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.776
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.776
OPUNC01G02240 Oryza punctata OPUNC01G02240 I 0.774
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.773
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.772
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.772
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.770
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.767
TCM_019508 Theobroma cacao TCM_019508 I 0.767
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.767
Pm015500 Prunus mume Pm015500 I 0.767
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.767
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.767
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.765
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.765
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.765
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.764
LjSGA_080421.2 Lotus japonicus LjSGA_080421.2 I 0.762
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.760
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I 0.760
Si001909m.g Setaria italica Si001909m.g I 0.760
gw1.135.126.1 Physcomitrella patens gw1.135.126.1 I 0.759
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.758
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.754
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.753
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.753
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.753
Eucgr.D00053 Eucalyptus grandis Eucgr.D00053 I 0.753
OBART01G02610 Oryza barthii OBART01G02610 I 0.753
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.753
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.753
OS01G0140700 Oryza sativa OS01G0140700 I 0.753
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.753
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.753
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.753
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.753
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.753
Bra025159 Brassica rapa Bra025159 I 0.750
BGIOSGA000982 Oryza indica BGIOSGA000982 I 0.750
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.750
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.747
MDP0000945267 Malus domestica MDP0000945267 I 0.747
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.747
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.745
Eucgr.L01673 Eucalyptus grandis Eucgr.L01673 I 0.740
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.740
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.740
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.740
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.740
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.740
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.740
OS01G0141000 Oryza sativa OS01G0141000 I 0.740
e_gw1.63.77.1 Physcomitrella patens e_gw1.63.77.1 I 0.733
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.733
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.733
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N 0.727
MDP0000321569 Malus domestica MDP0000321569 N 0.720
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.718
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.713
GSMUA_Achr9G21470_001 Musa acuminata GSMUA_Achr9G21470_001 N 0.712
MDP0000153589 Malus domestica MDP0000153589 N 0.707
Sb09g004140 Sorghum bicolor Sb09g004140 N 0.700
GSMUA_AchrUn_randomG06880_001 Musa acuminata GSMUA_AchrUn_randomG06880_001 I 0.700
SELMODRAFT_71153 Selaginella moellendorffii SELMODRAFT_71153 N 0.700
SELMODRAFT_66538 Selaginella moellendorffii SELMODRAFT_66538 N 0.700