Eucgr.B03048 (Eucalyptus grandis)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2)
PF02362 (B3) 		IPR001471
IPR003340 		Eucgr.B03048 T010586_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M06692_2.00 		Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN
NNHHMDDDWDDWWTHTGTTGN		 Dap-seq
OMalley et al.(2016)
RAV1_colamp_a 		0.820 0.820
RAV1
M06693_2.00 		Arabidopsis thaliana
VCAACADAWWHHAYNHB
VDNRTDDWWTHTGTTGB		 Dap-seq
OMalley et al.(2016)
RAV1_col 		0.820 0.820
RAV1
M02649_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 SELEX
Mathelier et al.(2014)
MA0582.1 		0.820 0.820
RAV1
M02650_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 SELEX
Mathelier et al.(2014)
MA0583.1 		0.820 0.820
RAV1
M09748_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 Transfac
Matys et al.(2006)
P$RAV1_01 		0.820 0.820
RAV1
M09749_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 Transfac
Matys et al.(2006)
P$RAV1_02 		0.820 0.820
ARF14
M01648_2.00 		Arabidopsis thaliana
RCAACAKA
TMTGTTGY		 PBM
Weirauch et al.(2014)
pTH8727 		0.760 0.760
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B03048.1 AP2 65 114
Eucgr.B03048.1 B3 197 303

Links

Other AP2,B3 family TFs
Other Eucalyptus grandis TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK15652.1 Cannabis sativa PK15652.1 I 0.873
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.860
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.853
MDP0000128924 Malus domestica MDP0000128924 I 0.853
MDP0000939633 Malus domestica MDP0000939633 I 0.853
TCM_011862 Theobroma cacao TCM_011862 I 0.853
Ca_24123 Cicer arietinum Ca_24123 I 0.847
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.847
Pm029015 Prunus mume Pm029015 I 0.847
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.840
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.840
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.840
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.840
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.840
29738.m001050 Ricinus communis 29738.m001050 I 0.840
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.840
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.840
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.839
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.833
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.833
Cla020675 Citrullus lanatus Cla020675 I 0.833
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.833
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.833
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.827
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.827
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.827
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.827
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.827
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.827
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.827
mgf019592m Mimulus guttatus mgf019592m I 0.827
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.827
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.827
Eucgr.D00053 Eucalyptus grandis Eucgr.D00053 I 0.820
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.820
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.820
Bra019821 Brassica rapa Bra019821 I 0.820
Bo5g015210 Brassica oleracea Bo5g015210 I 0.820
RAV1 Arabidopsis thaliana AT1G13260 D 0.820
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.813
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.813
Bra026917 Brassica rapa Bra026917 I 0.813
Ca_08436 Cicer arietinum Ca_08436 I 0.807
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.807
Eucgr.L01673 Eucalyptus grandis Eucgr.L01673 I 0.807
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.807
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.807
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.800
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.800
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.800
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.800
RAV2 Arabidopsis thaliana AT1G68840 D 0.800
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.793
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.793
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.793
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.793
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.787
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.787
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.787
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.787
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.787
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.787
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.787
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.787
Bo3g138550 Brassica oleracea Bo3g138550 I 0.787
OS05G0549800 Oryza sativa OS05G0549800 I 0.780
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.780
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.780
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.780
Si024576m.g Setaria italica Si024576m.g I 0.780
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.780
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I 0.780
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.780
Bra024735 Brassica rapa Bra024735 I 0.773
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.773
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.773
Bo5g043120 Brassica oleracea Bo5g043120 I 0.773
Bra011002 Brassica rapa Bra011002 I 0.773
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.773
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.773
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.773
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.772
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.772
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.770
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.767
Si004045m.g Setaria italica Si004045m.g I 0.767
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.767
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.767
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.767
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.767
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.767
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.767
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.767
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.767
Bra026509 Brassica rapa Bra026509 I 0.760
OB01G12600 Oryza brachyantha OB01G12600 I 0.760
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.760
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.760
OBART01G27360 Oryza barthii OBART01G27360 I 0.760
Bra038346 Brassica rapa Bra038346 I 0.760
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.760
Cla000872 Citrullus lanatus Cla000872 I 0.760
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.760
OS01G0693400 Oryza sativa OS01G0693400 I 0.760
ARF14 Arabidopsis thaliana AT3G25730 D 0.760
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.760
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.760
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.760
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.760
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.760
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.760
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.760
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.760
Bo2g061320 Brassica oleracea Bo2g061320 I 0.753
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.753
Bo2g138650 Brassica oleracea Bo2g138650 I 0.753
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.753
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.753
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.752
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.747
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.747
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.747
OS01G0140700 Oryza sativa OS01G0140700 I 0.747
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.747
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.747
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.747
OBART01G02610 Oryza barthii OBART01G02610 I 0.747
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.747
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.747
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.747
Si001909m.g Setaria italica Si001909m.g I 0.747
OPUNC01G02240 Oryza punctata OPUNC01G02240 I 0.747
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.747
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.747
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.747
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.747
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.740
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.740
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.740
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.740
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.740
Pm015500 Prunus mume Pm015500 I 0.740
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.740
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.740
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.740
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.740
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.740
TCM_019508 Theobroma cacao TCM_019508 I 0.740
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I 0.740
OS01G0141000 Oryza sativa OS01G0141000 I 0.740
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.740
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.740
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.740
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.740
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.738
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.733
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.733
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.733
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I 0.727
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.727
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I 0.720
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.720
MDP0000945267 Malus domestica MDP0000945267 I 0.713
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.713
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.707
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N 0.707
e_gw1.63.77.1 Physcomitrella patens e_gw1.63.77.1 I 0.707
Sb09g004140 Sorghum bicolor Sb09g004140 N 0.707