LPERR01G02380 (Leersia perrieri)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3) 		IPR001471
IPR003340 		LPERR01G02380 T010459_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M06692_2.00 		Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN
NNHHMDDDWDDWWTHTGTTGN		 Dap-seq
OMalley et al.(2016)
RAV1_colamp_a 		0.740 0.740
RAV1
M06693_2.00 		Arabidopsis thaliana
VCAACADAWWHHAYNHB
VDNRTDDWWTHTGTTGB		 Dap-seq
OMalley et al.(2016)
RAV1_col 		0.740 0.740
RAV1
M02649_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 SELEX
Mathelier et al.(2014)
MA0582.1 		0.740 0.740
RAV1
M02650_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 SELEX
Mathelier et al.(2014)
MA0583.1 		0.740 0.740
RAV1
M09748_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 Transfac
Matys et al.(2006)
P$RAV1_01 		0.740 0.740
RAV1
M09749_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 Transfac
Matys et al.(2006)
P$RAV1_02 		0.740 0.740
ARF14
M01648_2.00 		Arabidopsis thaliana
RCAACAKA
TMTGTTGY		 PBM
Weirauch et al.(2014)
pTH8727 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR01G02380.1 AP2 60 109
LPERR01G02380.1 B3 175 289

Links

Other AP2,B3 family TFs
Other Leersia perrieri TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.953
OS01G0141000 Oryza sativa OS01G0141000 I 0.953
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.953
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.953
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.953
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.953
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.947
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.878
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.872
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.872
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.867
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.860
Si001909m.g Setaria italica Si001909m.g I 0.847
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.841
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.839
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.839
OB01G12600 Oryza brachyantha OB01G12600 I 0.838
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.833
F775_20035 Aegilops tauschii F775_20035 N 0.833
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.833
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.833
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.833
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.832
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.831
OPUNC01G02240 Oryza punctata OPUNC01G02240 I 0.829
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.827
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.826
OPUNC01G02270 Oryza punctata OPUNC01G02270 N 0.825
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.820
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.813
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.812
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.812
OS01G0140700 Oryza sativa OS01G0140700 I 0.807
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.807
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.807
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.807
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.807
OBART01G02610 Oryza barthii OBART01G02610 I 0.807
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.807
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.807
Si004045m.g Setaria italica Si004045m.g I 0.804
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.800
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.793
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.793
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.773
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.772
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.767
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.767
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.767
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.767
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.762
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.760
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.760
PK15652.1 Cannabis sativa PK15652.1 I 0.760
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.760
MDP0000128924 Malus domestica MDP0000128924 I 0.760
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.760
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.760
OS01G0693400 Oryza sativa OS01G0693400 I 0.760
OBART01G27360 Oryza barthii OBART01G27360 I 0.760
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.760
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.760
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.755
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.753
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.753
TCM_011862 Theobroma cacao TCM_011862 I 0.753
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.753
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.753
Cla020675 Citrullus lanatus Cla020675 I 0.753
Ca_24123 Cicer arietinum Ca_24123 I 0.753
Sb09g004140 Sorghum bicolor Sb09g004140 N 0.753
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.753
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.747
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.747
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.747
Pm029015 Prunus mume Pm029015 I 0.747
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.747
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.747
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.747
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.747
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.747
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.747
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.747
MDP0000939633 Malus domestica MDP0000939633 I 0.747
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.745
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.745
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.745
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.743
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.742
RAV1 Arabidopsis thaliana AT1G13260 D 0.740
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.740
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.740
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.740
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.740
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.740
29738.m001050 Ricinus communis 29738.m001050 I 0.740
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.740
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.740
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.740
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.740
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.740
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.740
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.740
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.740
RAV2 Arabidopsis thaliana AT1G68840 D 0.740
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.740
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.740
Bo5g015210 Brassica oleracea Bo5g015210 I 0.740
Bra019821 Brassica rapa Bra019821 I 0.740
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.740
mgf019592m Mimulus guttatus mgf019592m I 0.740
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.740
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.738
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.738
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.733
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.733
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.733
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.733
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.733
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.733
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.733
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.733
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.733
Bra026917 Brassica rapa Bra026917 I 0.733
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.733
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.732
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.727
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.727
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.727
OS05G0549800 Oryza sativa OS05G0549800 I 0.727
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.727
ARF14 Arabidopsis thaliana AT3G25730 D 0.727
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.725
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.725
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.725
Si012228m.g Setaria italica Si012228m.g N 0.725
Bra011002 Brassica rapa Bra011002 I 0.720
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.720
Ca_08436 Cicer arietinum Ca_08436 I 0.720
Si024576m.g Setaria italica Si024576m.g I 0.720
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.720
Bo5g043120 Brassica oleracea Bo5g043120 I 0.718
Bra024735 Brassica rapa Bra024735 I 0.718
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.718
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.716
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.714
Bo3g138550 Brassica oleracea Bo3g138550 I 0.713
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.713
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.713
Bo2g061320 Brassica oleracea Bo2g061320 I 0.707
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.707
Bo2g138650 Brassica oleracea Bo2g138650 I 0.707
Bra038346 Brassica rapa Bra038346 I 0.707
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.707
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.707
Cla000872 Citrullus lanatus Cla000872 I 0.705
BGIOSGA000982 Oryza indica BGIOSGA000982 I 0.705
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I 0.703
Bra026509 Brassica rapa Bra026509 I 0.700