ARF14 (Arabidopsis thaliana)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3) 		IPR001471
IPR003340 		AT3G25730 T010405_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF14
M01647_2.00		 Arabidopsis thaliana
NNVACAKN
NMTGTBNN		 PBM
Weirauch et al.(2014)
pTH8296		 (Direct) (Direct)
ARF14
M01648_2.00		 Arabidopsis thaliana
RCAACAKA
TMTGTTGY		 PBM
Weirauch et al.(2014)
pTH8727		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M06692_2.00 		Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN
NNHHMDDDWDDWWTHTGTTGN		 Dap-seq
OMalley et al.(2016)
RAV1_colamp_a 		0.873 0.873
RAV1
M06693_2.00 		Arabidopsis thaliana
VCAACADAWWHHAYNHB
VDNRTDDWWTHTGTTGB		 Dap-seq
OMalley et al.(2016)
RAV1_col 		0.873 0.873
RAV1
M02649_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 SELEX
Mathelier et al.(2014)
MA0582.1 		0.873 0.873
RAV1
M02650_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 SELEX
Mathelier et al.(2014)
MA0583.1 		0.873 0.873
RAV1
M09748_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 Transfac
Matys et al.(2006)
P$RAV1_01 		0.873 0.873
RAV1
M09749_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 Transfac
Matys et al.(2006)
P$RAV1_02 		0.873 0.873
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01647_2.00 AP2 51 100
M01648_2.00 AP2 51 100
M01648_2.00 B3 174 280

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G25730.1 AP2 60 109
AT3G25730.1 B3 183 289

Links

Other AP2,B3 family TFs
Other Arabidopsis thaliana TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.980
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.947
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.940
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.913
Bo2g138650 Brassica oleracea Bo2g138650 I 0.893
Bra026509 Brassica rapa Bra026509 I 0.887
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.880
RAV1 Arabidopsis thaliana AT1G13260 D 0.873
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.873
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.873
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.867
Bra025159 Brassica rapa Bra025159 I 0.864
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.860
Bo5g015210 Brassica oleracea Bo5g015210 I 0.853
Bra026917 Brassica rapa Bra026917 I 0.853
Bra019821 Brassica rapa Bra019821 I 0.853
MDP0000128924 Malus domestica MDP0000128924 I 0.807
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.807
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.800
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.800
Pm029015 Prunus mume Pm029015 I 0.800
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.800
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.800
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.793
MDP0000939633 Malus domestica MDP0000939633 I 0.793
Cla020675 Citrullus lanatus Cla020675 I 0.793
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.793
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.793
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.792
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.787
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.787
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.787
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.787
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.787
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.787
PK15652.1 Cannabis sativa PK15652.1 I 0.787
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.787
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.787
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.787
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.787
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.785
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.785
Ca_24123 Cicer arietinum Ca_24123 I 0.780
Ca_08436 Cicer arietinum Ca_08436 I 0.780
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.780
RAV2 Arabidopsis thaliana AT1G68840 D 0.780
TCM_011862 Theobroma cacao TCM_011862 I 0.780
mgf019592m Mimulus guttatus mgf019592m I 0.780
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.780
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.780
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.780
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.780
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.780
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.780
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.780
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.778
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.775
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.774
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.774
OS01G0693400 Oryza sativa OS01G0693400 I 0.774
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.774
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.774
OBART01G27360 Oryza barthii OBART01G27360 I 0.774
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.774
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.774
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.773
29738.m001050 Ricinus communis 29738.m001050 I 0.773
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.772
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.772
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.771
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.769
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.769
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.769
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.769
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.767
Bra011002 Brassica rapa Bra011002 I 0.767
Bo3g138550 Brassica oleracea Bo3g138550 I 0.767
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.767
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.767
Cla000872 Citrullus lanatus Cla000872 I 0.765
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.765
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.764
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.764
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.762
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.760
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.760
Si024576m.g Setaria italica Si024576m.g I 0.760
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.760
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.760
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.760
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.758
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.758
Bo5g043120 Brassica oleracea Bo5g043120 I 0.758
Bra024735 Brassica rapa Bra024735 I 0.758
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.758
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.754
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.753
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.752
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.752
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.750
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.750
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.747
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.747
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.747
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.747
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I 0.747
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.746
OS05G0549800 Oryza sativa OS05G0549800 I 0.745
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.745
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.745
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.743
Si004045m.g Setaria italica Si004045m.g I 0.743
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.740
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.738
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.738
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.738
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.738
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.736
OB01G12600 Oryza brachyantha OB01G12600 I 0.736
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.736
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.735
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.733
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.733
Bra038346 Brassica rapa Bra038346 I 0.733
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.733
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.733
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.733
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.733
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.732
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.732
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.732
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.731
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.730
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.728
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.728
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.727
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.727
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.727
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.727
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I 0.727
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.727
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.727
Bo2g061320 Brassica oleracea Bo2g061320 I 0.727
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.727
OS01G0141000 Oryza sativa OS01G0141000 I 0.727
TCM_019508 Theobroma cacao TCM_019508 I 0.726
OPUNC01G02240 Oryza punctata OPUNC01G02240 I 0.726
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.725
gw1.135.126.1 Physcomitrella patens gw1.135.126.1 I 0.723
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.720
Si001909m.g Setaria italica Si001909m.g I 0.720
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.718
GSMUA_AchrUn_randomG06880_001 Musa acuminata GSMUA_AchrUn_randomG06880_001 I 0.716
e_gw1.63.77.1 Physcomitrella patens e_gw1.63.77.1 I 0.712
BGIOSGA000982 Oryza indica BGIOSGA000982 I 0.712
MDP0000945267 Malus domestica MDP0000945267 I 0.707
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.707
Eucgr.D00053 Eucalyptus grandis Eucgr.D00053 I 0.707
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.700
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.700
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.700
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.700
OS01G0140700 Oryza sativa OS01G0140700 I 0.700
OBART01G02610 Oryza barthii OBART01G02610 I 0.700
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.700
Pm015500 Prunus mume Pm015500 I 0.700
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.700