LPERR01G02360 (Leersia perrieri)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3) 		IPR001471
IPR003340 		LPERR01G02360 T010458_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M06692_2.00 		Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN
NNHHMDDDWDDWWTHTGTTGN		 Dap-seq
OMalley et al.(2016)
RAV1_colamp_a 		0.758 0.758
RAV1
M06693_2.00 		Arabidopsis thaliana
VCAACADAWWHHAYNHB
VDNRTDDWWTHTGTTGB		 Dap-seq
OMalley et al.(2016)
RAV1_col 		0.758 0.758
RAV1
M02649_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 SELEX
Mathelier et al.(2014)
MA0582.1 		0.758 0.758
RAV1
M02650_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 SELEX
Mathelier et al.(2014)
MA0583.1 		0.758 0.758
RAV1
M09748_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 Transfac
Matys et al.(2006)
P$RAV1_01 		0.758 0.758
RAV1
M09749_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 Transfac
Matys et al.(2006)
P$RAV1_02 		0.758 0.758
ARF14
M01648_2.00 		Arabidopsis thaliana
RCAACAKA
TMTGTTGY		 PBM
Weirauch et al.(2014)
pTH8727 		0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR01G02360.1 AP2 49 98
LPERR01G02360.1 B3 160 274

Links

Other AP2,B3 family TFs
Other Leersia perrieri TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB01G12600 Oryza brachyantha OB01G12600 I 0.879
OPUNC01G02240 Oryza punctata OPUNC01G02240 I 0.877
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.859
OBART01G02610 Oryza barthii OBART01G02610 I 0.859
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.859
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.859
OS01G0140700 Oryza sativa OS01G0140700 I 0.859
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.859
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.859
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.859
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.852
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.846
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.841
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.839
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.839
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.839
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.838
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.832
Si001909m.g Setaria italica Si001909m.g I 0.826
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.826
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.826
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.826
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.826
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.826
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.819
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.819
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.819
OS01G0141000 Oryza sativa OS01G0141000 I 0.819
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.819
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.819
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.819
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.819
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.819
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.816
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.813
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.812
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.812
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.808
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.805
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.805
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.805
PK15652.1 Cannabis sativa PK15652.1 I 0.800
OS01G0693400 Oryza sativa OS01G0693400 I 0.795
OBART01G27360 Oryza barthii OBART01G27360 I 0.795
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.795
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.795
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.795
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.795
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.795
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.792
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.792
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.789
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.789
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.788
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.787
Pm029015 Prunus mume Pm029015 I 0.785
MDP0000128924 Malus domestica MDP0000128924 I 0.785
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.785
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.780
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.779
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.779
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.779
OS05G0549800 Oryza sativa OS05G0549800 I 0.779
TCM_011862 Theobroma cacao TCM_011862 I 0.779
Si004045m.g Setaria italica Si004045m.g I 0.779
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.779
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.779
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.779
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.779
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.779
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.779
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.779
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.773
MDP0000939633 Malus domestica MDP0000939633 I 0.773
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.773
29738.m001050 Ricinus communis 29738.m001050 I 0.773
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.772
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.772
Si024576m.g Setaria italica Si024576m.g I 0.772
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.772
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.772
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.772
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.772
Ca_24123 Cicer arietinum Ca_24123 I 0.772
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.772
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.767
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.767
Cla020675 Citrullus lanatus Cla020675 I 0.767
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.765
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.765
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.765
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.765
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.765
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.765
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.765
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.765
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.765
mgf019592m Mimulus guttatus mgf019592m I 0.765
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.765
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.765
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.765
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.765
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.765
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.765
Sb09g004140 Sorghum bicolor Sb09g004140 N 0.760
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.758
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.758
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.758
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.758
Bra019821 Brassica rapa Bra019821 I 0.758
RAV2 Arabidopsis thaliana AT1G68840 D 0.758
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.758
Bo5g015210 Brassica oleracea Bo5g015210 I 0.758
F775_20035 Aegilops tauschii F775_20035 N 0.758
RAV1 Arabidopsis thaliana AT1G13260 D 0.753
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.753
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.753
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.752
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.752
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.752
Bra026917 Brassica rapa Bra026917 I 0.752
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.752
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.747
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.745
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.745
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.745
Ca_08436 Cicer arietinum Ca_08436 I 0.745
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.745
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.745
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.740
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.738
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.738
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.738
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.738
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.738
Bo3g138550 Brassica oleracea Bo3g138550 I 0.732
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.732
ARF14 Arabidopsis thaliana AT3G25730 D 0.732
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.732
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.732
Bra011002 Brassica rapa Bra011002 I 0.727
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.727
Bo5g043120 Brassica oleracea Bo5g043120 I 0.725
Cla000872 Citrullus lanatus Cla000872 I 0.725
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.725
Bra024735 Brassica rapa Bra024735 I 0.725
Bra038346 Brassica rapa Bra038346 I 0.725
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.723
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.718
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.718
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.718
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.718
Bo2g061320 Brassica oleracea Bo2g061320 I 0.713
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.711
Pm015500 Prunus mume Pm015500 I 0.711
Bo2g138650 Brassica oleracea Bo2g138650 I 0.707
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.705
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.705
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.705
Bra026509 Brassica rapa Bra026509 I 0.705