OPUNC01G02240 (Oryza punctata)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3) 		IPR001471
IPR003340 		OPUNC01G02240 T010483_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M06692_2.00 		Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN
NNHHMDDDWDDWWTHTGTTGN		 Dap-seq
OMalley et al.(2016)
RAV1_colamp_a 		0.760 0.760
RAV1
M06693_2.00 		Arabidopsis thaliana
VCAACADAWWHHAYNHB
VDNRTDDWWTHTGTTGB		 Dap-seq
OMalley et al.(2016)
RAV1_col 		0.760 0.760
RAV1
M02649_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 SELEX
Mathelier et al.(2014)
MA0582.1 		0.760 0.760
RAV1
M02650_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 SELEX
Mathelier et al.(2014)
MA0583.1 		0.760 0.760
RAV1
M09748_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 Transfac
Matys et al.(2006)
P$RAV1_01 		0.760 0.760
RAV1
M09749_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 Transfac
Matys et al.(2006)
P$RAV1_02 		0.760 0.760
ARF14
M01648_2.00 		Arabidopsis thaliana
RCAACAKA
TMTGTTGY		 PBM
Weirauch et al.(2014)
pTH8727 		0.726 0.726
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC01G02240.1 AP2 46 95
OPUNC01G02240.1 B3 159 265

Links

Other AP2,B3 family TFs
Other Oryza punctata TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I 0.973
ONIVA01G02970 Oryza nivara ONIVA01G02970 I 0.973
OS01G0140700 Oryza sativa OS01G0140700 I 0.973
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I 0.973
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I 0.973
OMERI01G02480 Oryza meridionalis OMERI01G02480 I 0.973
BGIOSGA002747 Oryza indica BGIOSGA002747 I 0.973
OBART01G02610 Oryza barthii OBART01G02610 I 0.973
OB01G12600 Oryza brachyantha OB01G12600 I 0.952
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I 0.884
LPERR01G02360 Leersia perrieri LPERR01G02360 I 0.877
Pavir.J23476 Panicum virgatum Pavir.J23476 I 0.870
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I 0.863
ONIVA01G02990 Oryza nivara ONIVA01G02990 I 0.856
OMERI01G02500 Oryza meridionalis OMERI01G02500 I 0.856
OS01G0141000 Oryza sativa OS01G0141000 I 0.856
BGIOSGA002753 Oryza indica BGIOSGA002753 I 0.856
BGIOSGA002748 Oryza indica BGIOSGA002748 I 0.856
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I 0.856
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I 0.856
Sb03g006590 Sorghum bicolor Sb03g006590 I 0.856
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.849
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I 0.849
Si001909m.g Setaria italica Si001909m.g I 0.849
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I 0.849
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.832
LPERR01G02380 Leersia perrieri LPERR01G02380 I 0.829
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.829
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.825
Traes_3B_90BE2090B Triticum aestivum Traes_3B_90BE2090B I 0.822
MLOC_63261 Hordeum vulgare MLOC_63261 I 0.822
MLOC_7940 Hordeum vulgare MLOC_7940 I 0.822
TRAES3BF098200010CFD_g Triticum aestivum TRAES3BF098200010CFD_g I 0.815
TRAES3BF108500010CFD_g Triticum aestivum TRAES3BF108500010CFD_g I 0.815
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I 0.815
Traes_3B_DF7E924991 Triticum aestivum Traes_3B_DF7E924991 I 0.815
Traes_3B_DF7E92499 Triticum aestivum Traes_3B_DF7E92499 I 0.815
Pavir.Eb00701 Panicum virgatum Pavir.Eb00701 I 0.815
MLOC_75135 Hordeum vulgare MLOC_75135 I 0.808
TRIUR3_24851 Triticum urartu TRIUR3_24851 I 0.792
MDP0000128924 Malus domestica MDP0000128924 I 0.788
MLOC_56567 Hordeum vulgare MLOC_56567 I 0.785
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.781
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.781
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.781
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.781
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.781
OS01G0693400 Oryza sativa OS01G0693400 I 0.781
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.781
OBART01G27360 Oryza barthii OBART01G27360 I 0.781
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.781
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.781
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.781
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.781
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.781
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.781
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.774
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.774
Cla020675 Citrullus lanatus Cla020675 I 0.774
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.774
OS05G0549800 Oryza sativa OS05G0549800 I 0.774
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.774
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.774
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.774
Si024576m.g Setaria italica Si024576m.g I 0.774
TCM_011862 Theobroma cacao TCM_011862 I 0.774
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.774
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.774
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.774
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.774
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.774
Pm029015 Prunus mume Pm029015 I 0.774
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.774
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.774
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.774
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.767
29738.m001050 Ricinus communis 29738.m001050 I 0.767
Ca_24123 Cicer arietinum Ca_24123 I 0.767
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.767
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.767
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.767
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.767
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.767
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.767
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.767
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.767
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.767
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.767
Sb09g004140 Sorghum bicolor Sb09g004140 N 0.767
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.767
RAV2 Arabidopsis thaliana AT1G68840 D 0.767
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.767
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.767
Sb03g031860 Sorghum bicolor Sb03g031860 I 0.767
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.767
Lus10021707.g Linum usitatissimum Lus10021707.g I 0.765
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.760
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I 0.760
TRAES3BF098300010CFD_g Triticum aestivum TRAES3BF098300010CFD_g I 0.760
MDP0000939633 Malus domestica MDP0000939633 I 0.760
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.760
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.760
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.760
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.760
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.760
mgf019592m Mimulus guttatus mgf019592m I 0.760
PK15652.1 Cannabis sativa PK15652.1 I 0.760
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.760
Si004045m.g Setaria italica Si004045m.g I 0.760
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.753
Bra026917 Brassica rapa Bra026917 I 0.753
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I 0.753
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.753
Bra019821 Brassica rapa Bra019821 I 0.753
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I 0.753
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.753
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.753
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.753
Bo5g015210 Brassica oleracea Bo5g015210 I 0.753
Ca_08436 Cicer arietinum Ca_08436 I 0.753
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.753
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.747
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.747
Bo3g138550 Brassica oleracea Bo3g138550 I 0.747
Bra024735 Brassica rapa Bra024735 I 0.747
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.747
Bo5g043120 Brassica oleracea Bo5g043120 I 0.747
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.747
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.747
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.747
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.747
Bra011002 Brassica rapa Bra011002 I 0.740
BRADI2G17610 Brachypodium distachyon BRADI2G17610 I 0.740
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.740
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.740
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.740
Carubv10019207m.g Capsella rubella Carubv10019207m.g I 0.740
Cla000872 Citrullus lanatus Cla000872 I 0.740
RAV1 Arabidopsis thaliana AT1G13260 D 0.740
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.740
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.738
Bo2g061320 Brassica oleracea Bo2g061320 I 0.733
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.733
F775_20035 Aegilops tauschii F775_20035 N 0.733
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.733
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.733
Bra038346 Brassica rapa Bra038346 I 0.733
Bo2g138650 Brassica oleracea Bo2g138650 I 0.726
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I 0.726
ARF14 Arabidopsis thaliana AT3G25730 D 0.726
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.726
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.726
Bra026509 Brassica rapa Bra026509 I 0.719
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I 0.719
GRMZM2G159592 Zea mays GRMZM2G159592 I 0.719
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.719
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.719
Pm015500 Prunus mume Pm015500 I 0.719
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.705
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I 0.705
GSMUA_Achr1G05400_001 Musa acuminata GSMUA_Achr1G05400_001 I 0.705