PRUPE_ppa026046mg (Prunus persica)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2)
PF02362 (B3) 		IPR001471
IPR003340 		PRUPE_ppa026046mg T010507_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M06692_2.00 		Arabidopsis thaliana
NCAACADAWWHHWHHHKDDNN
NNHHMDDDWDDWWTHTGTTGN		 Dap-seq
OMalley et al.(2016)
RAV1_colamp_a 		0.713 0.713
RAV1
M06693_2.00 		Arabidopsis thaliana
VCAACADAWWHHAYNHB
VDNRTDDWWTHTGTTGB		 Dap-seq
OMalley et al.(2016)
RAV1_col 		0.713 0.713
RAV1
M02649_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 SELEX
Mathelier et al.(2014)
MA0582.1 		0.713 0.713
RAV1
M02650_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 SELEX
Mathelier et al.(2014)
MA0583.1 		0.713 0.713
RAV1
M09748_2.00 		Arabidopsis thaliana
VNSCAACAKWDN
NHWMTGTTGSNB		 Transfac
Matys et al.(2006)
P$RAV1_01 		0.713 0.713
RAV1
M09749_2.00 		Arabidopsis thaliana
NHCWCCTGRNNH
DNNYCAGGWGDN		 Transfac
Matys et al.(2006)
P$RAV1_02 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ17675 AP2 21 70
EMJ17675 B3 153 257

Links

Other AP2,B3 family TFs
Other Prunus persica TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm015500 Prunus mume Pm015500 I 0.953
MDP0000945267 Malus domestica MDP0000945267 I 0.867
MDP0000153589 Malus domestica MDP0000153589 N 0.833
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N 0.820
MDP0000223137 Malus domestica MDP0000223137 N 0.807
MDP0000321569 Malus domestica MDP0000321569 N 0.807
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I 0.773
MTR_5g053920 Medicago truncatula MTR_5g053920 I 0.773
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I 0.767
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I 0.760
Pm029015 Prunus mume Pm029015 I 0.760
Ca_24123 Cicer arietinum Ca_24123 I 0.760
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I 0.760
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I 0.760
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I 0.753
mgf019592m Mimulus guttatus mgf019592m I 0.753
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I 0.753
RAV2 Arabidopsis thaliana AT1G68840 D 0.753
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I 0.753
TCM_011862 Theobroma cacao TCM_011862 I 0.753
GLYMA02G11060 Glycine max GLYMA02G11060 I 0.753
29738.m001050 Ricinus communis 29738.m001050 I 0.753
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I 0.753
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I 0.753
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I 0.747
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I 0.747
Bra011002 Brassica rapa Bra011002 I 0.747
Carubv10020536m.g Capsella rubella Carubv10020536m.g I 0.747
TEM1 Arabidopsis lyrata scaffold_102941.1 I 0.747
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I 0.747
TCM_019508 Theobroma cacao TCM_019508 I 0.747
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I 0.747
Ciclev10012300m.g Citrus clementina Ciclev10012300m.g I 0.747
MDP0000939633 Malus domestica MDP0000939633 I 0.747
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I 0.747
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I 0.747
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I 0.747
Bra038346 Brassica rapa Bra038346 I 0.747
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I 0.747
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I 0.747
MDP0000128924 Malus domestica MDP0000128924 I 0.740
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I 0.740
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I 0.740
Bo2g061320 Brassica oleracea Bo2g061320 I 0.740
Bo3g138550 Brassica oleracea Bo3g138550 I 0.740
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I 0.740
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I 0.740
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I 0.740
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I 0.740
MTR_1g093600 Medicago truncatula MTR_1g093600 I 0.740
GLYMA10G34760 Glycine max GLYMA10G34760 I 0.733
Bo5g043120 Brassica oleracea Bo5g043120 I 0.733
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I 0.733
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I 0.733
PK15652.1 Cannabis sativa PK15652.1 I 0.733
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I 0.733
Bra024735 Brassica rapa Bra024735 I 0.733
Sb09g027530 Sorghum bicolor Sb09g027530 I 0.733
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I 0.727
Ca_08436 Cicer arietinum Ca_08436 I 0.727
Cla020675 Citrullus lanatus Cla020675 I 0.727
GLYMA01G22260 Glycine max GLYMA01G22260 I 0.727
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I 0.727
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I 0.727
Cucsa.147340 Cucumis sativus Cucsa.147340 I 0.727
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I 0.727
Cucsa.283870 Cucumis sativus Cucsa.283870 I 0.727
GRMZM2G169654 Zea mays GRMZM2G169654 I 0.727
GRMZM2G059939 Zea mays GRMZM2G059939 I 0.727
Pavir.J13012 Panicum virgatum Pavir.J13012 I 0.720
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I 0.720
Lus10041487.g Linum usitatissimum Lus10041487.g I 0.720
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I 0.720
Carubv10009612m.g Capsella rubella Carubv10009612m.g I 0.720
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I 0.720
Si024576m.g Setaria italica Si024576m.g I 0.720
OPUNC05G22370 Oryza punctata OPUNC05G22370 I 0.720
Cla000872 Citrullus lanatus Cla000872 I 0.720
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I 0.720
GLYMA20G32730 Glycine max GLYMA20G32730 I 0.720
RAV1 Arabidopsis lyrata scaffold_101479.1 I 0.720
OMERI05G22110 Oryza meridionalis OMERI05G22110 I 0.720
Bo5g015210 Brassica oleracea Bo5g015210 I 0.713
Bra019821 Brassica rapa Bra019821 I 0.713
GSMUA_Achr6G01420_001 Musa acuminata GSMUA_Achr6G01420_001 I 0.713
SELMODRAFT_133669 Selaginella moellendorffii SELMODRAFT_133669 I 0.713
SELMODRAFT_110104 Selaginella moellendorffii SELMODRAFT_110104 I 0.713
RAV1 Arabidopsis thaliana AT1G13260 D 0.713
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I 0.713
ONIVA05G26000 Oryza nivara ONIVA05G26000 I 0.707
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I 0.707
Bra026917 Brassica rapa Bra026917 I 0.707
Si001909m.g Setaria italica Si001909m.g I 0.707
OS05G0549800 Oryza sativa OS05G0549800 I 0.707
BGIOSGA020315 Oryza indica BGIOSGA020315 I 0.707
Pavir.J00384 Panicum virgatum Pavir.J00384 I 0.706
MLOC_5512 Hordeum vulgare MLOC_5512 I 0.705
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I 0.700
TRIUR3_27886 Triticum urartu TRIUR3_27886 I 0.700
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I 0.700
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I 0.700
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I 0.700
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I 0.700
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I 0.700
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I 0.700
OS01G0693400 Oryza sativa OS01G0693400 I 0.700
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I 0.700
OPUNC01G27280 Oryza punctata OPUNC01G27280 I 0.700
ONIVA01G31290 Oryza nivara ONIVA01G31290 I 0.700
LPERR05G20600 Leersia perrieri LPERR05G20600 I 0.700
OBART01G27360 Oryza barthii OBART01G27360 I 0.700
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I 0.700
OMERI01G25110 Oryza meridionalis OMERI01G25110 I 0.700
LPERR01G23470 Leersia perrieri LPERR01G23470 I 0.700