CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000321569
(
Malus domestica
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
MDP0000321569
T010615_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000321569
AP2
31
80
SRYKGVVPQSNGRWGAQIYDKSHRVWLGTFNDEEEAAKTYNIALLKFRGL
MDP0000321569
B3
165
269
FEKVATPSDVGRLNRMVIPKQHAEKHFQVHLSVGFGKGVLLKFEDELGKVWRFGYCYWSSSQSYVLSKGWIRFVKEKKLKAGDIVMFQRSVGEDKKLFIECRPRK
Links
Other
AP2,B3
family TFs
Other
Malus domestica
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000153589
Malus domestica
MDP0000153589
N
0.933
MDP0000223137
Malus domestica
MDP0000223137
N
0.853
MDP0000945267
Malus domestica
MDP0000945267
I
0.847
Pm015500
Prunus mume
Pm015500
I
0.807
PRUPE_ppa026046mg
Prunus persica
PRUPE_ppa026046mg
I
0.807
gene10330-v1.0-hybrid
Fragaria vesca
gene10330-v1.0-hybrid
N
0.760
VIT_01s0011g03070
Vitis vinifera
VIT_01s0011g03070
I
0.733
Pm029015
Prunus mume
Pm029015
I
0.720
PRUPE_ppa006243mg
Prunus persica
PRUPE_ppa006243mg
I
0.720
MTR_5g053920
Medicago truncatula
MTR_5g053920
I
0.720
SapurV1A.1001s0020
Salix purpurea
SapurV1A.1001s0020
I
0.713
SapurV1A.3302s0010
Salix purpurea
SapurV1A.3302s0010
I
0.713
Gorai.008G185900
Gossypium raimondii
Gorai.008G185900
I
0.713
Gorai.013G080000
Gossypium raimondii
Gorai.013G080000
I
0.713
cassava43329.valid.m1
Manihot esculenta
cassava43329.valid.m1
I
0.713
TCM_019508
Theobroma cacao
TCM_019508
I
0.713
Ca_24123
Cicer arietinum
Ca_24123
I
0.713
Solyc05g009790.1
Solanum lycopersicum
Solyc05g009790.1
I
0.713
POPTR_0010s13930
Populus trichocarpa
POPTR_0010s13930
I
0.711
PK15652.1
Cannabis sativa
PK15652.1
I
0.707
Cla020675
Citrullus lanatus
Cla020675
I
0.707
TCM_011862
Theobroma cacao
TCM_011862
I
0.707
orange1.1g017035m.g
Citrus sinensis
orange1.1g017035m.g
I
0.707
Ciclev10031846m.g
Citrus clementina
Ciclev10031846m.g
I
0.707
MDP0000128924
Malus domestica
MDP0000128924
I
0.707
MDP0000939633
Malus domestica
MDP0000939633
I
0.707
gene03871-v1.0-hybrid
Fragaria vesca
gene03871-v1.0-hybrid
I
0.707
Cucsa.283870
Cucumis sativus
Cucsa.283870
I
0.707
cassava12324.valid.m1
Manihot esculenta
cassava12324.valid.m1
I
0.707
29738.m001050
Ricinus communis
29738.m001050
I
0.707
Aquca_002_01106
Aquilegia coerulea
Aquca_002_01106
I
0.707
AMTR_s00007p00238950
Amborella trichopoda
AMTR_s00007p00238950
I
0.707
GLYMA02G11060
Glycine max
GLYMA02G11060
I
0.700
Bra038346
Brassica rapa
Bra038346
I
0.700
VIT_14s0083g00130
Vitis vinifera
VIT_14s0083g00130
I
0.700
Cagra.1157s0007
Capsella grandiflora
Cagra.1157s0007
I
0.700
PGSC0003DMG400000811
Solanum tuberosum
PGSC0003DMG400000811
I
0.700
Ciclev10012300m.g
Citrus clementina
Ciclev10012300m.g
I
0.700
POPTR_0008s11600
Populus trichocarpa
POPTR_0008s11600
I
0.700
Gorai.005G138100
Gossypium raimondii
Gorai.005G138100
I
0.700
Aquca_026_00225
Aquilegia coerulea
Aquca_026_00225
I
0.700