CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000223137
(
Malus domestica
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
MDP0000223137
T010614_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000223137
AP2
31
80
SRYKGVVPQSNGRWGAQIYEKSNRVWLGTFYDEEEAAKTYDIASLKIRGL
MDP0000223137
B3
168
272
FEKVATPSDVGRLNRMVIPKRYAEKHFQVHQSVGFGKGVLLKFEDEVGKLWRFGYCYWSSSQSYVLSKGWIRFVKEKKLKVGDVVRFERSVGEDKKLFIDCRSRN
Links
Other
AP2,B3
family TFs
Other
Malus domestica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000153589
Malus domestica
MDP0000153589
N
0.887
MDP0000321569
Malus domestica
MDP0000321569
N
0.853
MDP0000945267
Malus domestica
MDP0000945267
I
0.847
PRUPE_ppa026046mg
Prunus persica
PRUPE_ppa026046mg
I
0.807
Pm015500
Prunus mume
Pm015500
I
0.800
gene10330-v1.0-hybrid
Fragaria vesca
gene10330-v1.0-hybrid
N
0.740
VIT_01s0011g03070
Vitis vinifera
VIT_01s0011g03070
I
0.707
MDP0000152089
Malus domestica
MDP0000152089
N
0.705
AMTR_s00007p00238950
Amborella trichopoda
AMTR_s00007p00238950
I
0.700
Ca_24123
Cicer arietinum
Ca_24123
I
0.700