MTR_0041s0120 (Medicago truncatula)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 MTR_0041s0120 T019692_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH17132 B3 92 177

Links

Other B3 family TFs
Other Medicago truncatula TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.833
27494.m000045 Ricinus communis 27494.m000045 I 0.775
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.775
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.775
27538.m000327 Ricinus communis 27538.m000327 I 0.762
TCM_043157 Theobroma cacao TCM_043157 I 0.762
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.762
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.750
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.738
OS04G0519700 Oryza sativa OS04G0519700 I 0.738
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.738
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.738
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.738
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.738
OBART04G18910 Oryza barthii OBART04G18910 I 0.738
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.738
ARF10 Oryza indica BGIOSGA016767 I 0.738
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.723
OB04G25990 Oryza brachyantha OB04G25990 I 0.713
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.711
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.711