MTR_0041s0110 (Medicago truncatula)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 MTR_0041s0110 T019691_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH17131 B3 131 233

Links

Other B3 family TFs
Other Medicago truncatula TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_7g101280 Medicago truncatula MTR_7g101280 I 1.000
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.835
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.773
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.763
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.763
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.763
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.763
TCM_043157 Theobroma cacao TCM_043157 I 0.763
Ca_17136 Cicer arietinum Ca_17136 I 0.763
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.763
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.763
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.763
Pm030120 Prunus mume Pm030120 I 0.763
mgf005300m Mimulus guttatus mgf005300m I 0.763
Cla018574 Citrullus lanatus Cla018574 I 0.763
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.763
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.763
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.763
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.763
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.763
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.763
MDP0000750392 Malus domestica MDP0000750392 I 0.763
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.763
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.763
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.763
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.763
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.763
PK17007.1 Cannabis sativa PK17007.1 I 0.763
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.763
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.763
mgf016139m Mimulus guttatus mgf016139m I 0.760
Ca_02541 Cicer arietinum Ca_02541 I 0.760
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.760
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.760
Pm031275 Prunus mume Pm031275 I 0.753
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.753
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.753
TCM_042067 Theobroma cacao TCM_042067 I 0.753
TCM_022163 Theobroma cacao TCM_022163 I 0.753
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.753
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.753
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.753
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.753
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.753
30078.m002329 Ricinus communis 30078.m002329 I 0.753
Bra011162 Brassica rapa Bra011162 I 0.753
MDP0000131481 Malus domestica MDP0000131481 I 0.753
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.753
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.753
MDP0000221322 Malus domestica MDP0000221322 I 0.753
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.753
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.753
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.753
mgf024607m Mimulus guttatus mgf024607m I 0.753
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.753
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.753
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.753
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.750
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.750
Si016509m.g Setaria italica Si016509m.g I 0.750
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.750
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.750
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.750
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.750
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.750
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.750
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.750
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.750
Bra011955 Brassica rapa Bra011955 I 0.750
ARF10 Arabidopsis thaliana AT2G28350 I 0.750
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.750
PK13393.1 Cannabis sativa PK13393.1 I 0.745
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.745
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.742
Ca_17624 Cicer arietinum Ca_17624 I 0.742
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.742
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.742
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.742
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.742
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.742
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.742
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.742
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.742
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.742
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.742
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.742
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.742
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.742
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.742
27538.m000327 Ricinus communis 27538.m000327 I 0.742
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.742
ARF16 Arabidopsis thaliana AT4G30080 D 0.742
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.742
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.742
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.742
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.742
ARF8 Oryza sativa OS02G0628600 I 0.742
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.742
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.742
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.742
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.742
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.742
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.742
Pm018533 Prunus mume Pm018533 I 0.742
Bo1g014600 Brassica oleracea Bo1g014600 I 0.742
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.742
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.740
Bo4g071620 Brassica oleracea Bo4g071620 I 0.740
OB02G32150 Oryza brachyantha OB02G32150 I 0.740
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.740
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.732
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.732
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.732
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.732
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.732
Bo7g114200 Brassica oleracea Bo7g114200 I 0.732
Bra024109 Brassica rapa Bra024109 I 0.732
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.732
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.732
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.732
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.732
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.732
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.732
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.732
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.732
Si005991m.g Setaria italica Si005991m.g I 0.732
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.732
Si034525m.g Setaria italica Si034525m.g I 0.732
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.732
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.732
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.732
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.732
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.732
ARF18 Oryza sativa OS06G0685700 I 0.732
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.732
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.732
OBART06G25230 Oryza barthii OBART06G25230 I 0.732
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.732
Ca_26121 Cicer arietinum Ca_26121 I 0.732
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.732
Cla013979 Citrullus lanatus Cla013979 I 0.732
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.732
OB06G32920 Oryza brachyantha OB06G32920 I 0.732
F775_32978 Aegilops tauschii F775_32978 I 0.729
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.724
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.722
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.722
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.722
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.722
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.722
OB10G20590 Oryza brachyantha OB10G20590 I 0.722
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.722
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.719
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.719
Ca_08488 Cicer arietinum Ca_08488 I 0.714
ARF22 Oryza sativa OS10G0479900 I 0.711
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.711
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.711
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.711
MTR_0041s0120 Medicago truncatula MTR_0041s0120 I 0.711
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.711
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.711
PK13064.1 Cannabis sativa PK13064.1 I 0.711
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.711
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.711
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.711
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.711
OBART10G13410 Oryza barthii OBART10G13410 I 0.711
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.711
27494.m000045 Ricinus communis 27494.m000045 I 0.711
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.711
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.710
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.708
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.705
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.704
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.701
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.701
OBART04G18910 Oryza barthii OBART04G18910 I 0.701
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.701
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.701
mgf000336m Mimulus guttatus mgf000336m I 0.701
ARF10 Oryza indica BGIOSGA016767 I 0.701
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.701
Cla008883 Citrullus lanatus Cla008883 I 0.701
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.701
OS04G0519700 Oryza sativa OS04G0519700 I 0.701
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.701
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.701