GLYMA12G08110 (Glycine max)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 GLYMA12G08110 T019304_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.907 0.907
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA12G08110.1 B3 109 211

Links

Other B3 family TFs
Other Glycine max TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA11G20490 Glycine max GLYMA11G20490 I 1.000
Ca_26121 Cicer arietinum Ca_26121 I 0.959
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.959
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.959
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.948
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.948
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.948
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.948
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.938
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.938
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.938
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.938
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.938
TCM_042067 Theobroma cacao TCM_042067 I 0.938
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.938
MDP0000221322 Malus domestica MDP0000221322 I 0.928
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.928
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.928
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.928
27538.m000327 Ricinus communis 27538.m000327 I 0.928
MDP0000131481 Malus domestica MDP0000131481 I 0.928
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.928
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.928
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.928
Pm031275 Prunus mume Pm031275 I 0.928
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.928
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.928
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.927
Ca_02541 Cicer arietinum Ca_02541 I 0.927
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.918
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.918
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.918
Cla018574 Citrullus lanatus Cla018574 I 0.918
Pm030120 Prunus mume Pm030120 I 0.918
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.918
TCM_043157 Theobroma cacao TCM_043157 I 0.918
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.918
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.918
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.918
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.918
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.918
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.918
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.918
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.918
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.918
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.918
Bra011162 Brassica rapa Bra011162 I 0.918
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.918
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.918
PK17007.1 Cannabis sativa PK17007.1 I 0.918
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.918
mgf016139m Mimulus guttatus mgf016139m I 0.917
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.907
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.907
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.907
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.907
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.907
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.907
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.907
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.907
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.907
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.907
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.907
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.907
30078.m002329 Ricinus communis 30078.m002329 I 0.907
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.907
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.907
Bo1g014600 Brassica oleracea Bo1g014600 I 0.907
Pm018533 Prunus mume Pm018533 I 0.907
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.907
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.907
ARF16 Arabidopsis thaliana AT4G30080 D 0.907
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.907
TCM_022163 Theobroma cacao TCM_022163 I 0.907
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.907
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.907
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.907
Bra011955 Brassica rapa Bra011955 I 0.907
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.897
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.897
ARF10 Arabidopsis thaliana AT2G28350 I 0.897
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.897
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.897
Si005991m.g Setaria italica Si005991m.g I 0.897
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.897
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.897
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.897
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.897
Bo7g114200 Brassica oleracea Bo7g114200 I 0.897
Si034525m.g Setaria italica Si034525m.g I 0.897
Bo4g071620 Brassica oleracea Bo4g071620 I 0.897
ARF18 Oryza sativa OS06G0685700 I 0.897
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.897
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.897
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.897
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.897
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.897
OBART06G25230 Oryza barthii OBART06G25230 I 0.897
OB06G32920 Oryza brachyantha OB06G32920 I 0.897
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.897
MDP0000750392 Malus domestica MDP0000750392 I 0.897
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.897
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.897
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.897
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.897
mgf024607m Mimulus guttatus mgf024607m I 0.897
mgf005300m Mimulus guttatus mgf005300m I 0.897
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.897
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.897
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.897
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.897
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.897
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.887
Ca_17136 Cicer arietinum Ca_17136 I 0.887
PK13064.1 Cannabis sativa PK13064.1 I 0.887
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.887
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.887
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.887
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.887
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.887
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.887
Bra024109 Brassica rapa Bra024109 I 0.887
F775_32978 Aegilops tauschii F775_32978 I 0.887
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.887
Cla013979 Citrullus lanatus Cla013979 I 0.887
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.887
OB10G20590 Oryza brachyantha OB10G20590 I 0.887
Si016509m.g Setaria italica Si016509m.g I 0.885
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.885
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.885
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.882
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.876
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.876
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.876
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.876
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.876
ARF8 Oryza sativa OS02G0628600 I 0.876
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.876
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.876
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.876
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.876
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.876
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.876
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.876
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.876
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.876
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.876
OBART10G13410 Oryza barthii OBART10G13410 I 0.876
mgf000336m Mimulus guttatus mgf000336m I 0.876
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.876
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.876
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.876
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.876
ARF22 Oryza sativa OS10G0479900 I 0.876
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.875
OB02G32150 Oryza brachyantha OB02G32150 I 0.875
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.874
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.866
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.866
Cla008883 Citrullus lanatus Cla008883 I 0.866
27494.m000045 Ricinus communis 27494.m000045 I 0.866
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.865
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.856
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.845
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.845
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.835
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.835
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.835
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.835
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.825
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.823
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.823
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.816
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.816
PK13393.1 Cannabis sativa PK13393.1 I 0.814
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.814
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.814
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.814
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.814
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.812
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.806
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.806
Ca_08488 Cicer arietinum Ca_08488 I 0.794
ARF10 Oryza indica BGIOSGA016767 I 0.794
OBART04G18910 Oryza barthii OBART04G18910 I 0.794
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.794
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.794
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.794
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.794
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.794
Si009541m.g Setaria italica Si009541m.g I 0.794
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.794
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.794
OS04G0519700 Oryza sativa OS04G0519700 I 0.794
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.783
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.763
OB04G25990 Oryza brachyantha OB04G25990 I 0.763
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.761
TCM_029792 Theobroma cacao TCM_029792 I 0.755
OBART02G24860 Oryza barthii OBART02G24860 I 0.747
TCM_035002 Theobroma cacao TCM_035002 I 0.742
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.742
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.742
Cla022413 Citrullus lanatus Cla022413 I 0.742
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.742
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.732
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.732
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.732
29908.m005953 Ricinus communis 29908.m005953 I 0.732
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.722
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.722
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.722
Ca_17624 Cicer arietinum Ca_17624 I 0.722
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.722
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.720
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.714
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.711
Pm019126 Prunus mume Pm019126 I 0.711
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.711
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.711
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.711
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.711
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.711
GSMUA_Achr5G18540_001 Musa acuminata GSMUA_Achr5G18540_001 I 0.710
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.701
MDP0000256621 Malus domestica MDP0000256621 I 0.701
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I 0.701