PK13393.1 (Cannabis sativa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PK13393.1 T024343_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.806 0.806
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK13393.1 B3 125 227

Links

Other B3 family TFs
Other Cannabis sativa TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27494.m000045 Ricinus communis 27494.m000045 I 0.908
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.888
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.887
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.887
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.856
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.856
Cla008883 Citrullus lanatus Cla008883 I 0.856
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.856
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.856
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.847
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.845
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.845
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.835
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.835
Pm018533 Prunus mume Pm018533 I 0.835
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.835
TCM_043157 Theobroma cacao TCM_043157 I 0.827
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.827
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.827
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.825
PK17007.1 Cannabis sativa PK17007.1 I 0.825
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.825
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.825
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.825
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.825
mgf005300m Mimulus guttatus mgf005300m I 0.825
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.825
Bra011162 Brassica rapa Bra011162 I 0.825
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.816
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.816
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.816
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.816
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.816
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.816
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.816
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.816
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.816
Pm030120 Prunus mume Pm030120 I 0.816
Cla018574 Citrullus lanatus Cla018574 I 0.816
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.816
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.816
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.814
30078.m002329 Ricinus communis 30078.m002329 I 0.814
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.814
Ca_17136 Cicer arietinum Ca_17136 I 0.814
TCM_022163 Theobroma cacao TCM_022163 I 0.814
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.814
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.814
Si034525m.g Setaria italica Si034525m.g I 0.814
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.814
Bra024109 Brassica rapa Bra024109 I 0.814
Bo1g014600 Brassica oleracea Bo1g014600 I 0.814
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.814
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.814
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.814
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.814
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.812
mgf016139m Mimulus guttatus mgf016139m I 0.812
Ca_02541 Cicer arietinum Ca_02541 I 0.812
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.806
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.806
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.806
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.806
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.806
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.806
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.806
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.806
OB10G20590 Oryza brachyantha OB10G20590 I 0.806
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.806
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.806
Bo7g114200 Brassica oleracea Bo7g114200 I 0.806
ARF16 Arabidopsis thaliana AT4G30080 D 0.806
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.806
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.806
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.804
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.804
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.804
MDP0000750392 Malus domestica MDP0000750392 I 0.804
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.804
MDP0000131481 Malus domestica MDP0000131481 I 0.804
MDP0000221322 Malus domestica MDP0000221322 I 0.804
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.804
PK13064.1 Cannabis sativa PK13064.1 I 0.804
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.804
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.804
ARF22 Oryza sativa OS10G0479900 I 0.804
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.804
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.804
OBART10G13410 Oryza barthii OBART10G13410 I 0.804
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.804
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.804
mgf024607m Mimulus guttatus mgf024607m I 0.804
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.804
Cla013979 Citrullus lanatus Cla013979 I 0.804
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.804
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.804
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.804
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.804
TCM_042067 Theobroma cacao TCM_042067 I 0.804
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.796
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.796
F775_32978 Aegilops tauschii F775_32978 I 0.796
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.796
27538.m000327 Ricinus communis 27538.m000327 I 0.796
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.796
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.796
Pm031275 Prunus mume Pm031275 I 0.796
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.796
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.794
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.794
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.794
Ca_26121 Cicer arietinum Ca_26121 I 0.794
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.794
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.794
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.794
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.794
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.794
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.794
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.794
OBART06G25230 Oryza barthii OBART06G25230 I 0.794
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.794
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.794
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.794
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.794
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.794
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.794
OB06G32920 Oryza brachyantha OB06G32920 I 0.794
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.794
ARF18 Oryza sativa OS06G0685700 I 0.794
Si005991m.g Setaria italica Si005991m.g I 0.794
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.792
OB02G32150 Oryza brachyantha OB02G32150 I 0.792
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.792
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.792
Si016509m.g Setaria italica Si016509m.g I 0.792
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.790
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.789
Bra011955 Brassica rapa Bra011955 I 0.786
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.786
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.786
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.786
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.786
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.786
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.786
ARF10 Arabidopsis thaliana AT2G28350 I 0.786
Bo4g071620 Brassica oleracea Bo4g071620 I 0.786
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.786
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.786
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.786
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.786
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.786
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.784
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.784
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.784
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.784
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.781
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.781
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.781
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.776
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.776
ARF8 Oryza sativa OS02G0628600 I 0.776
PK10136.1 Cannabis sativa PK10136.1 I 0.776
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.776
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.776
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.776
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.776
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.776
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.776
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.776
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.776
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.773
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.773
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.765
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.765
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.765
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.765
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.763
mgf000336m Mimulus guttatus mgf000336m I 0.755
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.755
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.755
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.755
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.750
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.750
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.745
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.745
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.745
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.745
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.745
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.724
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.724
ARF10 Oryza indica BGIOSGA016767 I 0.724
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.724
OS04G0519700 Oryza sativa OS04G0519700 I 0.724
OBART04G18910 Oryza barthii OBART04G18910 I 0.724
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.724
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.724
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.724
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.722
OB04G25990 Oryza brachyantha OB04G25990 I 0.714
GRMZM5G808366 Zea mays GRMZM5G808366 N 0.714
Si009541m.g Setaria italica Si009541m.g I 0.711
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.711
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.710