MDP0000131481 (Malus domestica)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 MDP0000131481 T023592_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.928 0.928
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000131481 B3 100 202

Links

Other B3 family TFs
Other Malus domestica TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 1.000
MDP0000221322 Malus domestica MDP0000221322 I 1.000
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.990
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.990
Pm031275 Prunus mume Pm031275 I 0.990
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.990
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.990
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.990
TCM_042067 Theobroma cacao TCM_042067 I 0.979
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.979
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.979
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.979
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.969
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.969
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.969
27538.m000327 Ricinus communis 27538.m000327 I 0.969
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.969
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.969
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.969
Pm030120 Prunus mume Pm030120 I 0.959
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.959
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.959
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.959
OB06G32920 Oryza brachyantha OB06G32920 I 0.959
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.959
Cla018574 Citrullus lanatus Cla018574 I 0.959
Si005991m.g Setaria italica Si005991m.g I 0.959
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.959
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.959
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.959
OBART06G25230 Oryza barthii OBART06G25230 I 0.959
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.959
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.959
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.959
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.959
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.959
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.959
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.959
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.959
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.959
ARF18 Oryza sativa OS06G0685700 I 0.959
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.959
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.959
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.959
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.959
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.959
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.959
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.948
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.948
Si034525m.g Setaria italica Si034525m.g I 0.948
PK17007.1 Cannabis sativa PK17007.1 I 0.948
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.948
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.948
mgf016139m Mimulus guttatus mgf016139m I 0.948
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.948
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.948
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.948
30078.m002329 Ricinus communis 30078.m002329 I 0.948
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.948
TCM_022163 Theobroma cacao TCM_022163 I 0.948
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.948
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.948
Ca_02541 Cicer arietinum Ca_02541 I 0.948
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.938
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.938
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.938
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.938
mgf005300m Mimulus guttatus mgf005300m I 0.938
TCM_043157 Theobroma cacao TCM_043157 I 0.938
Ca_26121 Cicer arietinum Ca_26121 I 0.938
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.938
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.938
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.938
Bra011162 Brassica rapa Bra011162 I 0.938
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.938
F775_32978 Aegilops tauschii F775_32978 I 0.938
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.938
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.938
OB10G20590 Oryza brachyantha OB10G20590 I 0.938
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.928
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.928
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.928
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.928
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.928
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.928
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.928
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.928
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.928
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.928
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.928
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.928
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.928
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.928
OBART10G13410 Oryza barthii OBART10G13410 I 0.928
mgf024607m Mimulus guttatus mgf024607m I 0.928
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.928
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.928
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.928
ARF16 Arabidopsis thaliana AT4G30080 D 0.928
ARF10 Arabidopsis thaliana AT2G28350 I 0.928
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.928
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.928
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.928
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.928
Bo1g014600 Brassica oleracea Bo1g014600 I 0.928
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.928
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.928
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.928
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.928
ARF22 Oryza sativa OS10G0479900 I 0.928
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.928
MDP0000750392 Malus domestica MDP0000750392 I 0.928
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.928
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.927
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.926
Pm018533 Prunus mume Pm018533 I 0.918
Cla008883 Citrullus lanatus Cla008883 I 0.918
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.918
Ca_17136 Cicer arietinum Ca_17136 I 0.918
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.918
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.918
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.918
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.918
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.918
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.918
Bo7g114200 Brassica oleracea Bo7g114200 I 0.918
Bra011955 Brassica rapa Bra011955 I 0.918
PK13064.1 Cannabis sativa PK13064.1 I 0.918
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.918
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.918
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.918
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.918
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.907
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.907
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.907
Si016509m.g Setaria italica Si016509m.g I 0.907
Bra024109 Brassica rapa Bra024109 I 0.907
Cla013979 Citrullus lanatus Cla013979 I 0.907
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.907
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.907
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.907
Bo4g071620 Brassica oleracea Bo4g071620 I 0.907
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.906
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.906
mgf000336m Mimulus guttatus mgf000336m I 0.897
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.897
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.897
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.897
ARF8 Oryza sativa OS02G0628600 I 0.897
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.897
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.897
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.897
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.897
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.897
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.897
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.897
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.897
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.897
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.887
OB02G32150 Oryza brachyantha OB02G32150 I 0.887
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.887
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.887
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.876
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.876
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.876
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.876
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.876
27494.m000045 Ricinus communis 27494.m000045 I 0.876
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.866
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.866
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.861
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.845
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.845
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.835
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.835
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.825
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.825
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.825
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.823
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.823
Ca_08488 Cicer arietinum Ca_08488 I 0.814
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.804
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.804
OBART04G18910 Oryza barthii OBART04G18910 I 0.804
PK13393.1 Cannabis sativa PK13393.1 I 0.804
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.804
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.804
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.804
OS04G0519700 Oryza sativa OS04G0519700 I 0.804
ARF10 Oryza indica BGIOSGA016767 I 0.804
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.804
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.786
Si009541m.g Setaria italica Si009541m.g I 0.784
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.784
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.772
OB04G25990 Oryza brachyantha OB04G25990 I 0.763
OBART02G24860 Oryza barthii OBART02G24860 I 0.760
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.753
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.753
Ca_17624 Cicer arietinum Ca_17624 I 0.742
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.742
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.742
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.742
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.732
PK10136.1 Cannabis sativa PK10136.1 I 0.732
TCM_035002 Theobroma cacao TCM_035002 I 0.732
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.732
Cla022413 Citrullus lanatus Cla022413 I 0.732
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.722
Pm019126 Prunus mume Pm019126 I 0.722
GSMUA_Achr5G18540_001 Musa acuminata GSMUA_Achr5G18540_001 I 0.722
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.722
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.722
TCM_029792 Theobroma cacao TCM_029792 I 0.717
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.714
MDP0000256621 Malus domestica MDP0000256621 I 0.711
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.711
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.711
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.711
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.701
29908.m005953 Ricinus communis 29908.m005953 I 0.701
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.701
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.701
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.701
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.701