Si009541m.g (Setaria italica)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Si009541m.g T021275_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.784 0.784
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si009541m B3 116 218

Links

Other B3 family TFs
Other Setaria italica TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.917
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.917
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.845
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.845
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.845
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.845
OS04G0519700 Oryza sativa OS04G0519700 I 0.845
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.845
OBART04G18910 Oryza barthii OBART04G18910 I 0.845
ARF10 Oryza indica BGIOSGA016767 I 0.845
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.815
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.814
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.804
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.803
OBART10G13410 Oryza barthii OBART10G13410 I 0.794
OB06G32920 Oryza brachyantha OB06G32920 I 0.794
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.794
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.794
OBART06G25230 Oryza barthii OBART06G25230 I 0.794
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.794
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.794
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.794
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.794
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.794
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.794
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.794
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.794
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.794
ARF22 Oryza sativa OS10G0479900 I 0.794
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.794
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.794
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.794
Ca_26121 Cicer arietinum Ca_26121 I 0.794
Si005991m.g Setaria italica Si005991m.g I 0.794
ARF18 Oryza sativa OS06G0685700 I 0.794
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.794
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.794
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.794
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.794
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.794
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.794
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.794
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.794
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.794
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.794
OB02G32150 Oryza brachyantha OB02G32150 I 0.792
mgf016139m Mimulus guttatus mgf016139m I 0.792
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.784
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.784
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.784
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.784
MDP0000221322 Malus domestica MDP0000221322 I 0.784
MDP0000131481 Malus domestica MDP0000131481 I 0.784
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.784
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.784
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.784
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.784
ARF8 Oryza sativa OS02G0628600 I 0.784
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.784
Pm031275 Prunus mume Pm031275 I 0.784
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.784
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.784
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.784
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.784
TCM_042067 Theobroma cacao TCM_042067 I 0.784
TCM_043157 Theobroma cacao TCM_043157 I 0.784
Si034525m.g Setaria italica Si034525m.g I 0.784
ARF16 Arabidopsis thaliana AT4G30080 D 0.784
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.784
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.784
PK13064.1 Cannabis sativa PK13064.1 I 0.784
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.784
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.784
Bra011162 Brassica rapa Bra011162 I 0.784
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.784
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.784
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.784
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.784
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.784
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.784
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.784
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.784
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.784
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.784
OB10G20590 Oryza brachyantha OB10G20590 I 0.784
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.784
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.784
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.784
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.784
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.784
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.784
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.784
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.784
Ca_02541 Cicer arietinum Ca_02541 I 0.781
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.781
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.781
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.781
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.781
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.781
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.781
Cla018574 Citrullus lanatus Cla018574 I 0.773
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.773
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.773
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.773
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.773
Ca_17136 Cicer arietinum Ca_17136 I 0.773
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.773
27538.m000327 Ricinus communis 27538.m000327 I 0.773
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.773
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.773
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.773
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.773
Pm030120 Prunus mume Pm030120 I 0.773
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.773
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.773
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.773
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.773
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.773
Pm018533 Prunus mume Pm018533 I 0.773
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.773
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.773
Bra024109 Brassica rapa Bra024109 I 0.773
Bo7g114200 Brassica oleracea Bo7g114200 I 0.773
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.773
Bo1g014600 Brassica oleracea Bo1g014600 I 0.773
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.773
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.773
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.773
F775_32978 Aegilops tauschii F775_32978 I 0.773
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.773
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.773
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.773
OB04G25990 Oryza brachyantha OB04G25990 I 0.773
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.773
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.773
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.773
PK17007.1 Cannabis sativa PK17007.1 I 0.773
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.773
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.773
Si016509m.g Setaria italica Si016509m.g I 0.773
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.773
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.773
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.773
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.773
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.773
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.763
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.763
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.763
TCM_022163 Theobroma cacao TCM_022163 I 0.763
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.763
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.763
mgf005300m Mimulus guttatus mgf005300m I 0.763
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.763
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.763
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.763
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.763
mgf000336m Mimulus guttatus mgf000336m I 0.763
mgf024607m Mimulus guttatus mgf024607m I 0.763
30078.m002329 Ricinus communis 30078.m002329 I 0.763
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.758
Bra011955 Brassica rapa Bra011955 I 0.753
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.753
ARF10 Arabidopsis thaliana AT2G28350 I 0.753
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.753
MDP0000750392 Malus domestica MDP0000750392 I 0.753
Bo4g071620 Brassica oleracea Bo4g071620 I 0.753
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.753
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.753
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.753
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.753
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.753
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.753
Cla008883 Citrullus lanatus Cla008883 I 0.753
Cla013979 Citrullus lanatus Cla013979 I 0.753
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.753
27494.m000045 Ricinus communis 27494.m000045 I 0.753
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.753
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.753
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.753
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.753
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.742
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.740
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.735
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.732
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.732
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.732
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.732
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.732
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.732
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.725
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.722
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.722
Pm019126 Prunus mume Pm019126 I 0.711
TCM_035002 Theobroma cacao TCM_035002 I 0.711
MDP0000256621 Malus domestica MDP0000256621 I 0.711
PK13393.1 Cannabis sativa PK13393.1 I 0.711
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.711
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.711
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.711
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.711
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.711
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.711
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.707
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.701
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.701
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.701
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.701
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.701
29908.m005953 Ricinus communis 29908.m005953 I 0.701
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.701
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.701
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.701