Solyc06g075150.2 (Solanum lycopersicum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Solyc06g075150.2 T021398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g075150.2.1 B3 103 205

Links

Other B3 family TFs
Other Solanum lycopersicum TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.949
Ca_26121 Cicer arietinum Ca_26121 I 0.806
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.806
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.806
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.806
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.804
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.802
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.796
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.796
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.796
PK13393.1 Cannabis sativa PK13393.1 I 0.796
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.796
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.796
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.796
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.794
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.794
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.794
mgf016139m Mimulus guttatus mgf016139m I 0.792
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.786
OBART06G25230 Oryza barthii OBART06G25230 I 0.786
MDP0000221322 Malus domestica MDP0000221322 I 0.786
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.786
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.786
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.786
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.786
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.786
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.786
ARF18 Oryza sativa OS06G0685700 I 0.786
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.786
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.786
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.786
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.786
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.786
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.786
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.786
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.786
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.786
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.786
mgf005300m Mimulus guttatus mgf005300m I 0.786
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.786
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.786
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.786
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.786
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.786
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.786
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.786
TCM_042067 Theobroma cacao TCM_042067 I 0.786
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.786
MDP0000131481 Malus domestica MDP0000131481 I 0.786
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.786
Ca_02541 Cicer arietinum Ca_02541 I 0.786
Pm031275 Prunus mume Pm031275 I 0.786
Pm030120 Prunus mume Pm030120 I 0.786
Cla018574 Citrullus lanatus Cla018574 I 0.786
Si005991m.g Setaria italica Si005991m.g I 0.786
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.786
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.786
PK17007.1 Cannabis sativa PK17007.1 I 0.786
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.786
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.786
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.786
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.786
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.786
OB06G32920 Oryza brachyantha OB06G32920 I 0.786
Pm018533 Prunus mume Pm018533 I 0.784
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.784
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.784
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.784
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.784
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.784
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.784
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.776
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.776
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.776
Si034525m.g Setaria italica Si034525m.g I 0.776
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.776
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.776
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.776
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.776
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.776
ARF16 Arabidopsis thaliana AT4G30080 D 0.776
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.776
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.776
TCM_022163 Theobroma cacao TCM_022163 I 0.776
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.776
Bra011162 Brassica rapa Bra011162 I 0.776
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.776
27538.m000327 Ricinus communis 27538.m000327 I 0.776
30078.m002329 Ricinus communis 30078.m002329 I 0.776
Ca_17136 Cicer arietinum Ca_17136 I 0.776
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.776
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.776
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.776
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.776
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.776
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.776
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.776
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.776
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.776
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.776
ARF22 Oryza sativa OS10G0479900 I 0.776
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.776
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.776
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.776
OB02G32150 Oryza brachyantha OB02G32150 I 0.776
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.776
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.776
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.776
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.776
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.776
OBART10G13410 Oryza barthii OBART10G13410 I 0.776
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.776
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.776
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.773
Bo1g014600 Brassica oleracea Bo1g014600 I 0.773
Bra024109 Brassica rapa Bra024109 I 0.773
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.771
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.771
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.765
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.765
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.765
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.765
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.765
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.765
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.765
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.765
Bo4g071620 Brassica oleracea Bo4g071620 I 0.765
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.765
Bo7g114200 Brassica oleracea Bo7g114200 I 0.765
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.765
MDP0000750392 Malus domestica MDP0000750392 I 0.765
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.765
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.765
ARF8 Oryza sativa OS02G0628600 I 0.765
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.765
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.765
F775_32978 Aegilops tauschii F775_32978 I 0.765
OB10G20590 Oryza brachyantha OB10G20590 I 0.765
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.765
TCM_043157 Theobroma cacao TCM_043157 I 0.765
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.758
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.755
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.755
ARF10 Arabidopsis thaliana AT2G28350 I 0.755
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.755
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.755
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.755
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.755
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.755
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.755
Bra011955 Brassica rapa Bra011955 I 0.755
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.755
Cla008883 Citrullus lanatus Cla008883 I 0.755
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.755
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.755
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.755
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.755
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.755
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.755
mgf024607m Mimulus guttatus mgf024607m I 0.755
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.750
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.750
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.745
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.745
27494.m000045 Ricinus communis 27494.m000045 I 0.745
Cla013979 Citrullus lanatus Cla013979 I 0.745
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.745
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.745
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.745
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.745
mgf000336m Mimulus guttatus mgf000336m I 0.745
Si016509m.g Setaria italica Si016509m.g I 0.745
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.745
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.745
PK13064.1 Cannabis sativa PK13064.1 I 0.742
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.742
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.735
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.735
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.735
Si009541m.g Setaria italica Si009541m.g I 0.735
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.735
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.732
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.724
ARF10 Oryza indica BGIOSGA016767 I 0.724
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.724
OBART04G18910 Oryza barthii OBART04G18910 I 0.724
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.724
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.724
OS04G0519700 Oryza sativa OS04G0519700 I 0.724
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.724
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.724
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.724
TCM_029792 Theobroma cacao TCM_029792 I 0.717
PK10136.1 Cannabis sativa PK10136.1 I 0.714
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.714
Bra003665 Brassica rapa Bra003665 N 0.711
Bo6g081980 Brassica oleracea Bo6g081980 N 0.711
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N 0.704
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.704
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.704
GLYMA13G02410 Glycine max GLYMA13G02410 N 0.704
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.704