ONIVA02G27180 (Oryza nivara)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 ONIVA02G27180 T020296_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.865 0.865
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA02G27180.1 B3 174 276

Links

Other B3 family TFs
Other Oryza nivara TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 1.000
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 1.000
ARF8 Oryza sativa OS02G0628600 I 1.000
LPERR02G20290 Leersia perrieri LPERR02G20290 I 1.000
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 1.000
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 1.000
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 1.000
BGIOSGA008657 Oryza indica BGIOSGA008657 I 1.000
OB02G32150 Oryza brachyantha OB02G32150 I 0.990
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.990
Si016509m.g Setaria italica Si016509m.g I 0.979
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.969
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.969
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.948
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.927
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.917
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.917
27538.m000327 Ricinus communis 27538.m000327 I 0.917
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.897
ARF22 Oryza sativa OS10G0479900 I 0.897
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.897
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.897
ARF18 Oryza sativa OS06G0685700 I 0.897
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.897
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.897
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.897
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.897
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.897
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.897
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.897
OBART06G25230 Oryza barthii OBART06G25230 I 0.897
OB06G32920 Oryza brachyantha OB06G32920 I 0.897
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.897
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.897
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.897
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.897
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.897
MDP0000131481 Malus domestica MDP0000131481 I 0.897
MDP0000221322 Malus domestica MDP0000221322 I 0.897
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.897
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.897
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.897
Si005991m.g Setaria italica Si005991m.g I 0.897
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.897
OBART10G13410 Oryza barthii OBART10G13410 I 0.897
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.897
TCM_042067 Theobroma cacao TCM_042067 I 0.897
Pm031275 Prunus mume Pm031275 I 0.897
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.897
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.897
mgf016139m Mimulus guttatus mgf016139m I 0.896
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.896
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.896
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.895
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.887
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.887
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.887
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.887
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.887
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.887
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.887
Si034525m.g Setaria italica Si034525m.g I 0.887
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.887
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.887
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.887
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.887
OB10G20590 Oryza brachyantha OB10G20590 I 0.887
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.887
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.885
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.885
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.885
F775_32978 Aegilops tauschii F775_32978 I 0.885
Ca_02541 Cicer arietinum Ca_02541 I 0.885
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.885
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.885
ARF10 Arabidopsis thaliana AT2G28350 I 0.885
Bra011955 Brassica rapa Bra011955 I 0.885
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.885
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.885
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.876
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.876
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.876
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.876
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.876
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.876
Cla018574 Citrullus lanatus Cla018574 I 0.876
Pm030120 Prunus mume Pm030120 I 0.876
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.876
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.876
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.876
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.876
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.876
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.876
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.876
PK17007.1 Cannabis sativa PK17007.1 I 0.876
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.876
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.876
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.876
Bo4g071620 Brassica oleracea Bo4g071620 I 0.875
TCM_043157 Theobroma cacao TCM_043157 I 0.875
OBART02G24860 Oryza barthii OBART02G24860 I 0.867
TCM_022163 Theobroma cacao TCM_022163 I 0.866
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.866
30078.m002329 Ricinus communis 30078.m002329 I 0.866
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.866
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.866
Cla008883 Citrullus lanatus Cla008883 I 0.866
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.866
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.866
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.866
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.866
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.866
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.866
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.866
Ca_26121 Cicer arietinum Ca_26121 I 0.866
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.866
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.866
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.866
PK13064.1 Cannabis sativa PK13064.1 I 0.866
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.866
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.866
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.866
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.866
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.866
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.865
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.865
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.863
mgf005300m Mimulus guttatus mgf005300m I 0.856
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.856
Bo7g114200 Brassica oleracea Bo7g114200 I 0.856
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.856
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.856
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.856
ARF16 Arabidopsis thaliana AT4G30080 D 0.856
Bra011162 Brassica rapa Bra011162 I 0.856
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.856
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.856
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.856
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.856
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.856
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.856
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.856
Ca_17136 Cicer arietinum Ca_17136 I 0.856
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.856
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.856
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.856
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.854
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.854
Bra024109 Brassica rapa Bra024109 I 0.845
MDP0000750392 Malus domestica MDP0000750392 I 0.845
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.845
Bo1g014600 Brassica oleracea Bo1g014600 I 0.845
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.845
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.845
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.845
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.845
Pm018533 Prunus mume Pm018533 I 0.845
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.845
27494.m000045 Ricinus communis 27494.m000045 I 0.844
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.844
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.844
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.844
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.835
mgf024607m Mimulus guttatus mgf024607m I 0.835
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.835
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.835
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.835
mgf000336m Mimulus guttatus mgf000336m I 0.835
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.833
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.833
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.833
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.833
Cla013979 Citrullus lanatus Cla013979 I 0.825
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.825
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.823
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.814
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.814
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.814
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.814
ARF10 Oryza indica BGIOSGA016767 I 0.812
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.812
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.812
OBART04G18910 Oryza barthii OBART04G18910 I 0.812
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.812
OS04G0519700 Oryza sativa OS04G0519700 I 0.812
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.812
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.804
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.804
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.804
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.796
Ca_08488 Cicer arietinum Ca_08488 I 0.791
Si009541m.g Setaria italica Si009541m.g I 0.784
PK13393.1 Cannabis sativa PK13393.1 I 0.776
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.772
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.768
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.765
OB04G25990 Oryza brachyantha OB04G25990 I 0.760
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.755
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.753
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.742
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.742
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.742
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.732
Cla022413 Citrullus lanatus Cla022413 I 0.732
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.720
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.719
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.719
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.719
TCM_029792 Theobroma cacao TCM_029792 I 0.717
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.714
PK10136.1 Cannabis sativa PK10136.1 I 0.704
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.701
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.701
Ca_17624 Cicer arietinum Ca_17624 I 0.701
MDP0000256621 Malus domestica MDP0000256621 I 0.701
TCM_035002 Theobroma cacao TCM_035002 I 0.701
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.701
Lus10024753.g Linum usitatissimum Lus10024753.g N 0.701
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.701
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.701
Pm019126 Prunus mume Pm019126 I 0.701