BRADI3G49320 (Brachypodium distachyon)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 BRADI3G49320 T019003_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.865 0.865
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G49320.1 B3 123 225

Links

Other B3 family TFs
Other Brachypodium distachyon TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.948
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.948
Si016509m.g Setaria italica Si016509m.g I 0.948
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.938
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.927
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.927
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.927
ARF8 Oryza sativa OS02G0628600 I 0.927
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.927
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.927
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.927
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.927
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.927
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.927
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.917
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.917
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.917
OB02G32150 Oryza brachyantha OB02G32150 I 0.917
27538.m000327 Ricinus communis 27538.m000327 I 0.917
Cla018574 Citrullus lanatus Cla018574 I 0.906
Pm030120 Prunus mume Pm030120 I 0.906
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.906
Pm031275 Prunus mume Pm031275 I 0.906
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.906
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.906
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.906
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.906
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.906
MDP0000131481 Malus domestica MDP0000131481 I 0.906
MDP0000221322 Malus domestica MDP0000221322 I 0.906
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.906
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.906
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.906
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.906
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.906
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.906
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.906
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.906
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.906
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.906
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.896
ARF18 Oryza sativa OS06G0685700 I 0.896
PK17007.1 Cannabis sativa PK17007.1 I 0.896
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.896
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.896
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.896
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.896
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.896
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.896
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.896
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.896
TCM_022163 Theobroma cacao TCM_022163 I 0.896
TCM_042067 Theobroma cacao TCM_042067 I 0.896
Ca_02541 Cicer arietinum Ca_02541 I 0.896
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.896
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.896
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.896
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.896
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.896
30078.m002329 Ricinus communis 30078.m002329 I 0.896
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.896
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.896
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.896
Si005991m.g Setaria italica Si005991m.g I 0.896
OB06G32920 Oryza brachyantha OB06G32920 I 0.896
OBART06G25230 Oryza barthii OBART06G25230 I 0.896
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.896
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.896
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.896
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.896
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.896
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.889
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.885
Ca_26121 Cicer arietinum Ca_26121 I 0.885
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.885
mgf005300m Mimulus guttatus mgf005300m I 0.885
mgf016139m Mimulus guttatus mgf016139m I 0.885
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.885
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.885
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.885
Si034525m.g Setaria italica Si034525m.g I 0.885
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.885
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.885
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.885
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.885
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.885
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.885
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.885
ARF10 Arabidopsis thaliana AT2G28350 I 0.885
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.885
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.885
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.885
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.885
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.885
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.885
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.885
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.885
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.885
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.885
OBART10G13410 Oryza barthii OBART10G13410 I 0.885
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.885
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.885
ARF22 Oryza sativa OS10G0479900 I 0.885
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.885
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.885
OB10G20590 Oryza brachyantha OB10G20590 I 0.885
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.885
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.885
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.875
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.875
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.875
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.875
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.875
Bra011955 Brassica rapa Bra011955 I 0.875
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.875
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.875
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.875
F775_32978 Aegilops tauschii F775_32978 I 0.875
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.875
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.875
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.875
PK13064.1 Cannabis sativa PK13064.1 I 0.875
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.875
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.875
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.875
MDP0000750392 Malus domestica MDP0000750392 I 0.875
TCM_043157 Theobroma cacao TCM_043157 I 0.875
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.875
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.875
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.875
mgf024607m Mimulus guttatus mgf024607m I 0.865
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.865
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.865
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.865
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.865
Bra011162 Brassica rapa Bra011162 I 0.865
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.865
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.865
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.865
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.865
ARF16 Arabidopsis thaliana AT4G30080 D 0.865
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.865
Bo7g114200 Brassica oleracea Bo7g114200 I 0.865
Bo4g071620 Brassica oleracea Bo4g071620 I 0.865
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.865
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.865
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.865
Ca_17136 Cicer arietinum Ca_17136 I 0.865
Cla008883 Citrullus lanatus Cla008883 I 0.865
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.865
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.865
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.865
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.865
Pm018533 Prunus mume Pm018533 I 0.865
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.865
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.854
Bra024109 Brassica rapa Bra024109 I 0.854
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.854
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.854
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.854
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.854
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.854
Bo1g014600 Brassica oleracea Bo1g014600 I 0.854
27494.m000045 Ricinus communis 27494.m000045 I 0.854
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.854
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.844
Cla013979 Citrullus lanatus Cla013979 I 0.844
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.844
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.844
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.835
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.833
mgf000336m Mimulus guttatus mgf000336m I 0.833
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.823
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.823
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.823
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.823
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.814
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.812
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.802
ARF10 Oryza indica BGIOSGA016767 I 0.802
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.802
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.802
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.802
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.802
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.802
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.802
OBART04G18910 Oryza barthii OBART04G18910 I 0.802
OS04G0519700 Oryza sativa OS04G0519700 I 0.802
PK13393.1 Cannabis sativa PK13393.1 I 0.781
Si009541m.g Setaria italica Si009541m.g I 0.781
Ca_08488 Cicer arietinum Ca_08488 I 0.771
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.771
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.771
OB04G25990 Oryza brachyantha OB04G25990 I 0.750
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.750
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.750
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.750
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.740
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.740
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.729
Cla022413 Citrullus lanatus Cla022413 I 0.729
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.729
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.729
Ca_17624 Cicer arietinum Ca_17624 I 0.729
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.729
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.729
PK10136.1 Cannabis sativa PK10136.1 I 0.719
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.719
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.719
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.719
Pm019126 Prunus mume Pm019126 I 0.719
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.708
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.708
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.708
29908.m005953 Ricinus communis 29908.m005953 I 0.708
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.708
MDP0000256621 Malus domestica MDP0000256621 I 0.701