Gorai.006G087600 (Gossypium raimondii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Gorai.006G087600 T023337_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEC2
M01695_2.00 		Arabidopsis thaliana
MTGCATGC
GCATGCAK		 PBM
Weirauch et al.(2014)
pTH8181 		0.735 0.735
LEC2
M02653_2.00 		Arabidopsis thaliana
NDDYGCATGNN
NNCATGCRHHN		 SELEX
Mathelier et al.(2014)
MA0581.1 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G087600.1 B3 325 426

Links

Other B3 family TFs
Other Gossypium raimondii TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_029838 Theobroma cacao TCM_029838 N 0.827
Gorai.009G168500 Gossypium raimondii Gorai.009G168500 I 0.816
SapurV1A.0032s0310 Salix purpurea SapurV1A.0032s0310 N 0.776
cassava45597.m1 Manihot esculenta cassava45597.m1 N 0.771
POPTR_0011s05380 Populus trichocarpa POPTR_0011s05380 I 0.763
Thhalv10009849m.g Eutrema salsugineum Thhalv10009849m.g I 0.755
LEC2 Arabidopsis thaliana AT1G28300 D 0.735
LEC2 Arabidopsis lyrata fgenesh2_kg.1__2994__AT1G28300.1 I 0.735
Bostr.15697s0149 Boechera stricta Bostr.15697s0149 I 0.724
Bo7g048240 Brassica oleracea Bo7g048240 I 0.704
Bo5g055730 Brassica oleracea Bo5g055730 I 0.704