orange1.1g041864m.g (Citrus sinensis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 orange1.1g041864m.g T023761_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.879 0.879
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.879 0.879
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g041864m B3 111 213

Links

Other B3 family TFs
Other Citrus sinensis TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.970
30131.m006860 Ricinus communis 30131.m006860 I 0.929
TCM_017321 Theobroma cacao TCM_017321 I 0.909
Pm016099 Prunus mume Pm016099 I 0.909
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.898
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.898
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.888
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.888
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.879
FUS3 Arabidopsis thaliana AT3G26790 D 0.879
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.869
Bo00285s530 Brassica oleracea Bo00285s530 I 0.869
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.869
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.869
Bra032953 Brassica rapa Bra032953 I 0.869
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.869
Cla009252 Citrullus lanatus Cla009252 I 0.859
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.856
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.848
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.848
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.848
Ca_05976 Cicer arietinum Ca_05976 I 0.838
Lus10041521.g Linum usitatissimum Lus10041521.g I 0.818
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.818
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.768
Bo7g083910 Brassica oleracea Bo7g083910 I 0.768
FUS3 Vitis vinifera VIT_14s0068g01290 I 0.758