Pm016099 (Prunus mume)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pm016099 T022082_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.888 0.888
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.888 0.888
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm016099 B3 126 228

Links

Other B3 family TFs
Other Prunus mume TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.980
TCM_017321 Theobroma cacao TCM_017321 I 0.949
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.929
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.918
LjSGA_037319.1 Lotus japonicus LjSGA_037319.1 I 0.912
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.909
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.908
30131.m006860 Ricinus communis 30131.m006860 I 0.899
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.898
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.898
Ca_05976 Cicer arietinum Ca_05976 I 0.898
Cla009252 Citrullus lanatus Cla009252 I 0.897
MDP0000268649 Malus domestica MDP0000268649 I 0.896
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.888
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.888
FUS3 Arabidopsis thaliana AT3G26790 D 0.888
evm.TU.supercontig_70.84 Carica papaya evm.TU.supercontig_70.84 I 0.887
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.885
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.878
Bo00285s530 Brassica oleracea Bo00285s530 I 0.878
Bra032953 Brassica rapa Bra032953 I 0.878
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.876
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.866
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.859
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.859
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.847
Lus10041521.g Linum usitatissimum Lus10041521.g I 0.827
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.826
FUS3 Vitis vinifera VIT_14s0068g01290 I 0.768
Bo7g083910 Brassica oleracea Bo7g083910 I 0.747