LjSGA_037319.1 (Lotus japonicus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 LjSGA_037319.1 T024428_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.868 0.868
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.868 0.868
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_037319.1 B3 11 82

Links

Other B3 family TFs
Other Lotus japonicus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.926
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.926
Ca_05976 Cicer arietinum Ca_05976 I 0.912
Pm016099 Prunus mume Pm016099 I 0.912
Cla009252 Citrullus lanatus Cla009252 I 0.897
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.897
Bo00285s530 Brassica oleracea Bo00285s530 I 0.882
Bra032953 Brassica rapa Bra032953 I 0.882
TCM_017321 Theobroma cacao TCM_017321 I 0.868
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.868
FUS3 Arabidopsis thaliana AT3G26790 D 0.868
MDP0000268649 Malus domestica MDP0000268649 I 0.866
30131.m006860 Ricinus communis 30131.m006860 I 0.853
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.853
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.794
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.794
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.794
mgf021117m Mimulus guttatus mgf021117m N 0.706