cassava21091.m1 (Manihot esculenta)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 cassava21091.m1 T028065_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava21091.m1 BED ZF 16 66

Links

Other BED ZF family TFs
Other Manihot esculenta TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.953
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.930
TCM_001836 Theobroma cacao TCM_001836 N 0.930
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.930
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.930
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.930
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.907
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.907
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.860
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.860
mgf000829m Mimulus guttatus mgf000829m N 0.860
PK13949.1 Cannabis sativa PK13949.1 N 0.837
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.791
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.791
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.791
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.791
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.791
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.786
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.786
Pm014562 Prunus mume Pm014562 N 0.786
Aquca_102_00001 Aquilegia coerulea Aquca_102_00001 N 0.721
Bo6g110620 Brassica oleracea Bo6g110620 N 0.721