Cucsa.185330 (Cucumis sativus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Cucsa.185330 T028084_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.185330.1 BED ZF 27 78

Links

Other BED ZF family TFs
Other Cucumis sativus TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.955
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.953
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.953
PK13949.1 Cannabis sativa PK13949.1 N 0.930
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.930
TCM_001836 Theobroma cacao TCM_001836 N 0.930
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.909
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.909
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.909
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.907
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.886
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.857
Pm014562 Prunus mume Pm014562 N 0.857
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.857
mgf000829m Mimulus guttatus mgf000829m N 0.841
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.810
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.810
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.810
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.767
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.727
Bo6g110620 Brassica oleracea Bo6g110620 N 0.714