CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA12606
(
Caenorhabditis japonica
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
CJA12606
T075744_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA12606
C2H2 ZF
26
48
FKCPECTKAFKFKHHLKEHIRIH
CJA12606
C2H2 ZF
54
75
FECQQCHKRFSHSGSYSSHMSS
CJA12606
Homeodomain
237
293
LRSRSFLNDSQVAILQNHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQNTRAKERR
CJA12606
C2H2 ZF
506
528
FSCDQCDKVFGKQSSLARHKYEH
CJA12606
C2H2 ZF
534
556
YKCDICEKAFKHKHHLTEHKRLH
CJA12606
C2H2 ZF
562
583
FQCDKCLKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Caenorhabditis japonica
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE10982
Caenorhabditis remanei
CRE10982
N
1.000
CBN31083
Caenorhabditis brenneri
CBN31083
N
1.000
CBN24068
Caenorhabditis brenneri
CBN24068
N
1.000
CBG10736
Caenorhabditis briggsae
CBG10736
N
1.000
zag-1
Caenorhabditis elegans
WBGene00006970
N
0.994
HPLM_0000501901
Haemonchus placei
HPLM_0000501901
N
0.935
LOAG_17507
Loa loa
LOAG_17507
N
0.918
Bm3681
Brugia malayi
Bm3681
N
0.918
SVE_1904900
Strongyloides venezuelensis
SVE_1904900
N
0.912
nDi.2.2.2.g01416
Dirofilaria immitis
nDi.2.2.2.g01416
N
0.912
SPAL_0000385600
Strongyloides papillosus
SPAL_0000385600
N
0.912
SSTP_0000865200
Strongyloides stercoralis
SSTP_0000865200
N
0.906
PTRK_0001785400
Parastrongyloides trichosuri
PTRK_0001785400
N
0.906
EVEC_0000655901
Enterobius vermicularis
EVEC_0000655901
N
0.906
ASU_02713
Ascaris suum
ASU_02713
N
0.906
DICVIV_05785
Dictyocaulus viviparus
DICVIV_05785
N
0.900
SMUV_0000904801
Syphacia muris
SMUV_0000904801
N
0.900
L892_g21703
Steinernema scapterisci
L892_g21703
N
0.888
L893_g27223
Steinernema glaseri
L893_g27223
N
0.888
L889_g29456
Steinernema feltiae
L889_g29456
N
0.888
L898_g6841
Steinernema monticolum
L898_g6841
N
0.888
L596_g23719
Steinernema carpocapsae
L596_g23719
N
0.888
nRc.2.0.1.g22459
Romanomermis culicivorax
nRc.2.0.1.g22459
N
0.829
HCOI00581300
Haemonchus contortus
HCOI00581300
N
0.806
EFV59106
Trichinella spiralis
EFV59106
N
0.788
D918_03480
Trichuris suis
D918_03480
N
0.787
TMUE_s0010015900
Trichuris muris
TMUE_s0010015900
N
0.787
TTRE_0000009201
Trichuris trichiura
TTRE_0000009201
N
0.787
SBAD_0000454101
Soboliphyme baturini
SBAD_0000454101
N
0.785
WBGene00241636
Onchocerca volvulus
WBGene00241636
N
0.782
nAv.1.0.1.g02082
Acanthocheilonema viteae
nAv.1.0.1.g02082
N
0.782
ASIM_0001204901
Anisakis simplex
ASIM_0001204901
N
0.771
D917_10103
Trichinella nativa
D917_10103
N
0.762
YQE_04155
Dendroctonus ponderosae
YQE_04155
N
0.747
YQE_00812
Dendroctonus ponderosae
YQE_00812
N
0.747
YQE_02569
Dendroctonus ponderosae
YQE_02569
N
0.733