CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zag-1
(
Caenorhabditis elegans
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
WBGene00006970
T076201_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F28F9.1
C2H2 ZF
24
46
FKCPECTKAFKFKHHLKEHIRIH
F28F9.1
C2H2 ZF
52
73
FECQQCHKRFSHSGSYSSHMSS
F28F9.1
Homeodomain
224
280
LRSRSFLNDSQVAVLQNHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQNTRAKERR
F28F9.1
C2H2 ZF
481
503
FSCDQCDKVFGKQSSLARHKYEH
F28F9.1
C2H2 ZF
509
531
YKCDICEKAFKHKHHLTEHKRLH
F28F9.1
C2H2 ZF
537
558
FQCDKCLKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Caenorhabditis elegans
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE10982
Caenorhabditis remanei
CRE10982
N
0.994
CBN31083
Caenorhabditis brenneri
CBN31083
N
0.994
CJA12606
Caenorhabditis japonica
CJA12606
N
0.994
CBN24068
Caenorhabditis brenneri
CBN24068
N
0.994
CBG10736
Caenorhabditis briggsae
CBG10736
N
0.994
HPLM_0000501901
Haemonchus placei
HPLM_0000501901
N
0.929
nDi.2.2.2.g01416
Dirofilaria immitis
nDi.2.2.2.g01416
N
0.918
Bm3681
Brugia malayi
Bm3681
N
0.912
SPAL_0000385600
Strongyloides papillosus
SPAL_0000385600
N
0.912
SVE_1904900
Strongyloides venezuelensis
SVE_1904900
N
0.912
ASU_02713
Ascaris suum
ASU_02713
N
0.912
LOAG_17507
Loa loa
LOAG_17507
N
0.912
SSTP_0000865200
Strongyloides stercoralis
SSTP_0000865200
N
0.906
PTRK_0001785400
Parastrongyloides trichosuri
PTRK_0001785400
N
0.906
EVEC_0000655901
Enterobius vermicularis
EVEC_0000655901
N
0.900
SMUV_0000904801
Syphacia muris
SMUV_0000904801
N
0.894
L889_g29456
Steinernema feltiae
L889_g29456
N
0.882
L892_g21703
Steinernema scapterisci
L892_g21703
N
0.882
L893_g27223
Steinernema glaseri
L893_g27223
N
0.882
L596_g23719
Steinernema carpocapsae
L596_g23719
N
0.882
L898_g6841
Steinernema monticolum
L898_g6841
N
0.882
nRc.2.0.1.g22459
Romanomermis culicivorax
nRc.2.0.1.g22459
N
0.824
HCOI00581300
Haemonchus contortus
HCOI00581300
N
0.800
EFV59106
Trichinella spiralis
EFV59106
N
0.794
D918_03480
Trichuris suis
D918_03480
N
0.788
WBGene00241636
Onchocerca volvulus
WBGene00241636
N
0.788
TMUE_s0010015900
Trichuris muris
TMUE_s0010015900
N
0.788
TTRE_0000009201
Trichuris trichiura
TTRE_0000009201
N
0.788
nAv.1.0.1.g02082
Acanthocheilonema viteae
nAv.1.0.1.g02082
N
0.776
D917_10103
Trichinella nativa
D917_10103
N
0.768
ASIM_0001204901
Anisakis simplex
ASIM_0001204901
N
0.765
YQE_00812
Dendroctonus ponderosae
YQE_00812
N
0.741
YQE_04155
Dendroctonus ponderosae
YQE_04155
N
0.741
YQE_02569
Dendroctonus ponderosae
YQE_02569
N
0.706
SINV25541
Solenopsis invicta
SINV25541
N
0.700