CGI_10027813 (Crassostrea gigas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CGI_10027813 T083621_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.783 0.850
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.764 0.805
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.764 0.805
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.764 0.805
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.764 0.805
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC40170 C2H2 ZF 225 247
EKC40170 C2H2 ZF 256 278
EKC40170 C2H2 ZF 282 304
EKC40170 C2H2 ZF 310 332
EKC40170 C2H2 ZF 338 358

Links

Other C2H2 ZF family TFs
Other Crassostrea gigas TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GD24004 Drosophila simulans FBgn0195364 I 0.793
SINV14155 Solenopsis invicta SINV14155 I 0.784
ACEP13085 Atta cephalotes ACEP13085 I 0.784
GF15382 Drosophila ananassae FBgn0092407 I 0.783
esg Drosophila melanogaster FBgn0001981 D 0.783
GE20968 Drosophila yakuba FBgn0238253 I 0.783
GG25158 Drosophila erecta FBgn0117283 I 0.783
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.781
GL26425 Drosophila persimilis FBgn0164007 I 0.781
GJ17399 Drosophila virilis FBgn0204571 I 0.778
GI17894 Drosophila mojavensis FBgn0140635 I 0.778
GK18133 Drosophila willistoni FBgn0220132 I 0.778
LCUP013268 Lucilia cuprina LCUP013268 I 0.778
MDOA014024 Musca domestica MDOA014024 I 0.778
GH13754 Drosophila grimshawi FBgn0121230 I 0.778
LotgiG114290 Lottia gigantea LotgiG114290 I 0.778
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.777
YQE_07640 Dendroctonus ponderosae YQE_07640 I 0.776
Sakowv30043351m.g Saccoglossus kowalevskii Sakowv30043351m.g I 0.775
LCUP006862 Lucilia cuprina LCUP006862 I 0.774
MDOA006149 Musca domestica MDOA006149 I 0.774
SMAR001314 Strigamia maritima SMAR001314 I 0.772
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.770
SMAR001730 Strigamia maritima SMAR001730 I 0.769
CapteG76255 Capitella teleta CapteG76255 I 0.768
TC014474 Tribolium castaneum TC014474 I 0.768
RPRC005707 Rhodnius prolixus RPRC005707 I 0.767
Cflo_07707--XP_393944.1_APIME Camponotus floridanus Cflo_07707--XP_393944.1_APIME I 0.767
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.767
GJ23203 Drosophila virilis FBgn0210305 I 0.767
GI22651 Drosophila mojavensis FBgn0145379 I 0.767
GH13119 Drosophila grimshawi FBgn0120596 I 0.767
CLEC007039 Cimex lectularius CLEC007039 I 0.767
L798_10614 Zootermopsis nevadensis L798_10614 I 0.766
GE19402 Drosophila yakuba FBgn0236745 I 0.764
GG24207 Drosophila erecta FBgn0116339 I 0.764
GL26594 Drosophila persimilis FBgn0164176 I 0.764
GF14525 Drosophila ananassae FBgn0091552 I 0.764
GA17994 Drosophila pseudoobscura FBgn0078003 I 0.764
wor Drosophila melanogaster FBgn0001983 D 0.764
GM14357 Drosophila sechellia FBgn0169282 I 0.764
GD21956 Drosophila simulans FBgn0193371 I 0.764
GK18253 Drosophila willistoni FBgn0220252 I 0.764
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.763
PHUM091060 Pediculus humanus PHUM091060 I 0.763
HMEL002306 Heliconius melpomene HMEL002306 I 0.758
BGIBMGA006230 Bombyx mori BGIBMGA006230 I 0.756
MCINX001355 Melitaea cinxia MCINX001355 I 0.756
KGM_17970 Danaus plexippus KGM_17970 I 0.756