CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GH13119
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0120596
T115291_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.819
0.965
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.819
0.965
wor
M06051_2.00
Drosophila melanogaster
CACCTGY
RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.819
0.965
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY
RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.819
0.965
esg
M06050_2.00
Drosophila melanogaster
CACCTGH
DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.771
0.842
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0147025
C2H2 ZF
354
376
YHCKDCGKSYSTYSGLSKHQQFH
FBpp0147025
C2H2 ZF
389
411
FSCKNCEKTYVSLGALKMHIRTH
FBpp0147025
C2H2 ZF
415
437
CKCPICGKAFSRPWLLQGHIRTH
FBpp0147025
C2H2 ZF
443
465
FSCQHCNRAFADRSNLRAHMQTH
FBpp0147025
C2H2 ZF
471
492
YSCPSCTKSFSRMSLLAKHLQT
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GI22651
Drosophila mojavensis
FBgn0145379
I
0.823
GJ23203
Drosophila virilis
FBgn0210305
I
0.823
GF14525
Drosophila ananassae
FBgn0091552
I
0.819
GA17994
Drosophila pseudoobscura
FBgn0078003
I
0.819
GK18253
Drosophila willistoni
FBgn0220252
I
0.819
GG24207
Drosophila erecta
FBgn0116339
I
0.819
GD21956
Drosophila simulans
FBgn0193371
I
0.819
GL26594
Drosophila persimilis
FBgn0164176
I
0.819
GE19402
Drosophila yakuba
FBgn0236745
I
0.819
GM14357
Drosophila sechellia
FBgn0169282
I
0.819
wor
Drosophila melanogaster
FBgn0001983
D
0.819
PHUM091060
Pediculus humanus
PHUM091060
I
0.789
L798_10614
Zootermopsis nevadensis
L798_10614
I
0.786
HMEL002306
Heliconius melpomene
HMEL002306
I
0.785
MCINX001355
Melitaea cinxia
MCINX001355
I
0.783
BGIBMGA006230
Bombyx mori
BGIBMGA006230
I
0.783
KGM_17970
Danaus plexippus
KGM_17970
I
0.783
MDOA006149
Musca domestica
MDOA006149
I
0.782
LCUP006862
Lucilia cuprina
LCUP006862
I
0.782
NV17743
Nasonia vitripennis
NV17743
I
0.781
Cflo_07707--XP_393944.1_APIME
Camponotus floridanus
Cflo_07707--XP_393944.1_APIME
I
0.779
HHAL006775-PA
Halyomorpha halys
HHAL006775-PA
I
0.779
RPRC005707
Rhodnius prolixus
RPRC005707
I
0.777
CLEC007039
Cimex lectularius
CLEC007039
I
0.777
TC014474
Tribolium castaneum
TC014474
I
0.777
LDEC001157
Leptinotarsa decemlineata
LDEC001157
I
0.775
PPAI008011
Phlebotomus papatasi
PPAI008011
I
0.774
GE20968
Drosophila yakuba
FBgn0238253
I
0.771
GF15382
Drosophila ananassae
FBgn0092407
I
0.771
LCUP013268
Lucilia cuprina
LCUP013268
I
0.771
MDOA014024
Musca domestica
MDOA014024
I
0.771
esg
Drosophila melanogaster
FBgn0001981
D
0.771
GA17666
Drosophila pseudoobscura
FBgn0077676
I
0.771
GG25158
Drosophila erecta
FBgn0117283
I
0.771
GL26425
Drosophila persimilis
FBgn0164007
I
0.771
GJ17399
Drosophila virilis
FBgn0204571
I
0.769
GI17894
Drosophila mojavensis
FBgn0140635
I
0.769
GH13754
Drosophila grimshawi
FBgn0121230
I
0.769
GK18133
Drosophila willistoni
FBgn0220132
I
0.769
CGI_10027813
Crassostrea gigas
CGI_10027813
I
0.767
SINV14155
Solenopsis invicta
SINV14155
I
0.767
YQE_07640
Dendroctonus ponderosae
YQE_07640
I
0.767
ACEP13085
Atta cephalotes
ACEP13085
I
0.767
LotgiG114290
Lottia gigantea
LotgiG114290
I
0.765
GD24004
Drosophila simulans
FBgn0195364
I
0.762
SMAR001314
Strigamia maritima
SMAR001314
I
0.760
estExt_fgenesh2_kg.C_190001
Branchiostoma floridae
estExt_fgenesh2_kg.C_190001
I
0.759
SMAR001730
Strigamia maritima
SMAR001730
I
0.759
snai2
Gasterosteus aculeatus
ENSGACG00000017935
I
0.758
ENSLOCG00000005992
Lepisosteus oculatus
ENSLOCG00000005992
I
0.756
ENSGMOG00000002669
Gadus morhua
ENSGMOG00000002669
I
0.756
ENSONIG00000009542
Oreochromis niloticus
ENSONIG00000009542
I
0.756
snai2
Tetraodon nigroviridis
ENSTNIG00000008504
I
0.756
ENSXMAG00000019030
Xiphophorus maculatus
ENSXMAG00000019030
I
0.756
snai2
Takifugu rubripes
ENSTRUG00000006860
I
0.756
ENSPFOG00000014336
Poecilia formosa
ENSPFOG00000014336
I
0.756
snai2
Oryzias latipes
ENSORLG00000017475
I
0.756