LotgiG114290 (Lottia gigantea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LotgiG114290 T121596_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.781 0.868
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.769 0.833
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.769 0.833
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.769 0.833
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.769 0.833
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.761 0.842
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.761 0.842
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.761 0.842
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.761 0.842
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.761 0.842
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.761 0.842
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.761 0.842
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.761 0.842
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.761 0.842
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.761 0.842
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.761 0.842
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.761 0.842
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.758 0.833
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP114290 C2H2 ZF 300 322
LotgiP114290 C2H2 ZF 331 353
LotgiP114290 C2H2 ZF 357 379
LotgiP114290 C2H2 ZF 385 407
LotgiP114290 C2H2 ZF 413 434

Links

Other C2H2 ZF family TFs
Other Lottia gigantea TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.784
SMAR001314 Strigamia maritima SMAR001314 I 0.783
L798_10614 Zootermopsis nevadensis L798_10614 I 0.783
TC014474 Tribolium castaneum TC014474 I 0.782
LCUP006862 Lucilia cuprina LCUP006862 I 0.782
GF15382 Drosophila ananassae FBgn0092407 I 0.781
esg Drosophila melanogaster FBgn0001981 D 0.781
GE20968 Drosophila yakuba FBgn0238253 I 0.781
GG25158 Drosophila erecta FBgn0117283 I 0.781
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.780
GK18133 Drosophila willistoni FBgn0220132 I 0.778
PHUM091060 Pediculus humanus PHUM091060 I 0.778
NV17743 Nasonia vitripennis NV17743 I 0.778
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.778
CapteG76255 Capitella teleta CapteG76255 I 0.778
GJ17399 Drosophila virilis FBgn0204571 I 0.778
GL26425 Drosophila persimilis FBgn0164007 I 0.778
MDOA014024 Musca domestica MDOA014024 I 0.778
MDOA006149 Musca domestica MDOA006149 I 0.778
GH13754 Drosophila grimshawi FBgn0121230 I 0.778
GI17894 Drosophila mojavensis FBgn0140635 I 0.778
LCUP013268 Lucilia cuprina LCUP013268 I 0.778
CGI_10027813 Crassostrea gigas CGI_10027813 I 0.778
KGM_17970 Danaus plexippus KGM_17970 I 0.776
MCINX001355 Melitaea cinxia MCINX001355 I 0.776
BGIBMGA006230 Bombyx mori BGIBMGA006230 I 0.775
YQE_07640 Dendroctonus ponderosae YQE_07640 I 0.774
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.773
HMEL002306 Heliconius melpomene HMEL002306 I 0.773
CLEC007039 Cimex lectularius CLEC007039 I 0.771
ACEP13085 Atta cephalotes ACEP13085 I 0.771
SINV14155 Solenopsis invicta SINV14155 I 0.771
GD24004 Drosophila simulans FBgn0195364 I 0.771
RPRC005707 Rhodnius prolixus RPRC005707 I 0.771
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.769
GF14525 Drosophila ananassae FBgn0091552 I 0.769
GG24207 Drosophila erecta FBgn0116339 I 0.769
GM14357 Drosophila sechellia FBgn0169282 I 0.769
GK18253 Drosophila willistoni FBgn0220252 I 0.769
GE19402 Drosophila yakuba FBgn0236745 I 0.769
GJ23203 Drosophila virilis FBgn0210305 I 0.769
GD21956 Drosophila simulans FBgn0193371 I 0.769
wor Drosophila melanogaster FBgn0001983 D 0.769
GI22651 Drosophila mojavensis FBgn0145379 I 0.769
SMAR001730 Strigamia maritima SMAR001730 I 0.768
GL26594 Drosophila persimilis FBgn0164176 I 0.765
GA17994 Drosophila pseudoobscura FBgn0078003 I 0.765
GH13119 Drosophila grimshawi FBgn0120596 I 0.765
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I 0.761
Gfo_R012649 Geospiza fortis Gfo_R012649 I 0.761
Ogr04681 Ophisaurus gracilis Ogr04681 I 0.761
Pvit_15376 Pogona vitticeps Pvit_15376 I 0.761
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I 0.761
Tal_R003673 Tyto alba Tal_R003673 I 0.761
ENSP00000380034 Macaca fascicularis ENSP00000380034 I 0.761
ENSP00000020945-D1 Bos grunniens ENSP00000020945-D1 I 0.761
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I 0.761
SNAI2 Equus caballus ENSECAG00000010120 I 0.761
Aan_R012932 Calypte anna Aan_R012932 I 0.761
Afo_R005870 Aptenodytes forsteri Afo_R005870 I 0.761
Brh_R006038 Buceros rhinoceros Brh_R006038 I 0.761
Alligator_sinensis_CCG016283.1 Alligator sinensis Alligator_sinensis_CCG016283.1 I 0.761
AAB34088 Xenopus laevis AAB34088 I 0.761
AAK54135 Xenopus tropicalis AAK54135 I 0.761
snai2.L Xenopus laevis XB-GENE-6255814 I 0.761
snai2 Xenopus tropicalis XB-GENE-487371 I 0.761
snai2.S Xenopus laevis XB-GENE-865699 I 0.761
ENSAPLG00000003920 Anas platyrhynchos ENSAPLG00000003920 I 0.761
SNAI2 Anolis carolinensis ENSACAG00000012332 I 0.761
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I 0.761
SNAI2 Bos taurus ENSBTAG00000013227 I 0.761
SNAI2 Canis familiaris ENSCAFG00000006638 I 0.761
AAK54139 Xenopus laevis AAK54139 I 0.761
AAK54137 Xenopus laevis AAK54137 I 0.761
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I 0.761
SNAI2 Callithrix jacchus ENSCJAG00000013499 I 0.761
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I 0.761
SNAI2 Taeniopygia guttata ENSTGUG00000010914 I 0.761
ENSFALG00000005762 Ficedula albicollis ENSFALG00000005762 I 0.761
SNAI2 Procavia capensis ENSPCAG00000001788 I 0.761
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I 0.761
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I 0.761
SNAI2 Otolemur garnettii ENSOGAG00000010500 I 0.761
ENSOARG00000013030 Ovis aries ENSOARG00000013030 I 0.761
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I 0.761
ENSPSIG00000016395 Pelodiscus sinensis ENSPSIG00000016395 I 0.761
SNAI2 Pan troglodytes ENSPTRG00000020235 I 0.761
ENSSSCG00000026570 Sus scrofa ENSSSCG00000026570 I 0.761
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I 0.761
ENSSSCG00000024404 Sus scrofa ENSSSCG00000024404 I 0.761
ENSSHAG00000004205 Sarcophilus harrisii ENSSHAG00000004205 I 0.761
SNAI2 Pteropus vampyrus ENSPVAG00000009457 I 0.761
Snai2 Rattus norvegicus ENSRNOG00000047699 I 0.761
SNAI2 Ornithorhynchus anatinus ENSOANG00000007267 I 0.761
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I 0.761
ENSLACG00000005413 Latimeria chalumnae ENSLACG00000005413 I 0.761
SNAI2 Loxodonta africana ENSLAFG00000009299 I 0.761
SNAI2 Gorilla gorilla ENSGGOG00000000959 I 0.761
ENSGALG00000015241 Gallus gallus ENSGALG00000015241 I 0.761
SNAI2 Homo sapiens ENSG00000019549 D 0.761
SNAI2 Meleagris gallopavo ENSMGAG00000010813 I 0.761
SNAI2 Microcebus murinus ENSMICG00000000335 I 0.761
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I 0.761
Snai2 Mus musculus ENSMUSG00000022676 D 0.761
SNAI2 Felis catus ENSFCAG00000015779 I 0.761
SNAI2 Monodelphis domestica ENSMODG00000010173 I 0.761
SNAI2 Macaca mulatta ENSMMUG00000016195 I 0.761
SNAI2 Myotis lucifugus ENSMLUG00000001086 I 0.761
Sakowv30043351m.g Saccoglossus kowalevskii Sakowv30043351m.g I 0.759
ENSMEUG00000009510 Macropus eugenii ENSMEUG00000009510 I 0.758
Cflo_07707--XP_393944.1_APIME Camponotus floridanus Cflo_07707--XP_393944.1_APIME I 0.757