Cflo_07707--XP_393944.1_APIME (Camponotus floridanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cflo_07707--XP_393944.1_APIME T133824_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.779 0.842
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.779 0.842
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.779 0.842
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.779 0.842
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.771 0.860
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_07707--XP_393944.1_APIME C2H2 ZF 312 334
Cflo_07707--XP_393944.1_APIME C2H2 ZF 346 368
Cflo_07707--XP_393944.1_APIME C2H2 ZF 372 394
Cflo_07707--XP_393944.1_APIME C2H2 ZF 400 422
Cflo_07707--XP_393944.1_APIME C2H2 ZF 428 449

Links

Other C2H2 ZF family TFs
Other Camponotus floridanus TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SINV14155 Solenopsis invicta SINV14155 I 0.791
L798_10614 Zootermopsis nevadensis L798_10614 I 0.791
ACEP13085 Atta cephalotes ACEP13085 I 0.789
NV17743 Nasonia vitripennis NV17743 I 0.787
PHUM091060 Pediculus humanus PHUM091060 I 0.787
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.784
MCINX001355 Melitaea cinxia MCINX001355 I 0.783
BGIBMGA006230 Bombyx mori BGIBMGA006230 I 0.783
HMEL002306 Heliconius melpomene HMEL002306 I 0.783
GA17994 Drosophila pseudoobscura FBgn0078003 I 0.783
GL26594 Drosophila persimilis FBgn0164176 I 0.783
KGM_17970 Danaus plexippus KGM_17970 I 0.783
CLEC007039 Cimex lectularius CLEC007039 I 0.782
GD24004 Drosophila simulans FBgn0195364 I 0.781
GJ23203 Drosophila virilis FBgn0210305 I 0.779
GE19402 Drosophila yakuba FBgn0236745 I 0.779
GK18253 Drosophila willistoni FBgn0220252 I 0.779
GD21956 Drosophila simulans FBgn0193371 I 0.779
GH13119 Drosophila grimshawi FBgn0120596 I 0.779
wor Drosophila melanogaster FBgn0001983 D 0.779
GM14357 Drosophila sechellia FBgn0169282 I 0.779
GF14525 Drosophila ananassae FBgn0091552 I 0.779
GG24207 Drosophila erecta FBgn0116339 I 0.779
GI22651 Drosophila mojavensis FBgn0145379 I 0.779
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.777
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.775
RPRC005707 Rhodnius prolixus RPRC005707 I 0.774
TC014474 Tribolium castaneum TC014474 I 0.774
GK18133 Drosophila willistoni FBgn0220132 I 0.773
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.771
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.771
esg Drosophila melanogaster FBgn0001981 D 0.771
LCUP013268 Lucilia cuprina LCUP013268 I 0.771
MDOA014024 Musca domestica MDOA014024 I 0.771
GE20968 Drosophila yakuba FBgn0238253 I 0.771
GF15382 Drosophila ananassae FBgn0092407 I 0.771
GL26425 Drosophila persimilis FBgn0164007 I 0.771
GJ17399 Drosophila virilis FBgn0204571 I 0.771
GI17894 Drosophila mojavensis FBgn0140635 I 0.771
GH13754 Drosophila grimshawi FBgn0121230 I 0.771
GG25158 Drosophila erecta FBgn0117283 I 0.771
CGI_10027813 Crassostrea gigas CGI_10027813 I 0.767
SMAR001730 Strigamia maritima SMAR001730 I 0.762
YQE_07640 Dendroctonus ponderosae YQE_07640 I 0.760
SMAR001314 Strigamia maritima SMAR001314 I 0.760
CapteG76255 Capitella teleta CapteG76255 I 0.759
Sakowv30043351m.g Saccoglossus kowalevskii Sakowv30043351m.g I 0.757
LotgiG114290 Lottia gigantea LotgiG114290 I 0.757