CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Zkscan6
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000018347
T101003_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF18
M08316_2.00
Homo sapiens
NSNRTTCACACY
RGTGTGAAYNSN
ChIP-seq
Schmitges et al.(2016)
P17022.MEME
0.803
0.947
ZNF18
M07602_2.00
Homo sapiens
RGTGTGARBNBNNNN
NNNNVNVYTCACACY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData
0.803
0.947
ZNF18
M08901_2.00
Homo sapiens
NVDVTTCACACY
RGTGTGAABHBN
Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C
0.803
0.947
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000018491
C2H2 ZF
416
437
TCRECGKTFYRNSQLVFHQRTH
ENSMUSP00000018491
C2H2 ZF
443
465
FHCHICKKAFLRSSDFVKHQRTH
ENSMUSP00000018491
C2H2 ZF
471
493
CKCDYCGKGFSDFSGLRHHEKIH
ENSMUSP00000018491
C2H2 ZF
499
521
YKCPLCEKSFIQRSNFNRHQRVH
ENSMUSP00000018491
C2H2 ZF
527
549
YKCTHCGKQFSWSSSLDKHQRSH
ENSMUSP00000071406
C2H2 ZF
416
437
TCRECGKTFYRNSQLVFHQRTH
ENSMUSP00000071406
C2H2 ZF
443
465
FHCHICKKAFLRSSDFVKHQRTH
ENSMUSP00000071406
C2H2 ZF
471
493
CKCDYCGKGFSDFSGLRHHEKIH
ENSMUSP00000071406
C2H2 ZF
499
521
YKCPLCEKSFIQRSNFNRHQRVH
ENSMUSP00000071406
C2H2 ZF
527
549
YKCTHCGKQFSWSSSLDKHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Zfp18
Rattus norvegicus
ENSRNOG00000003981
I
0.823
ZNF18
Oryctolagus cuniculus
ENSOCUG00000010095
I
0.811
ENSPPYG00000007992
Pongo abelii
ENSPPYG00000007992
I
0.811
ZNF18
Pan troglodytes
ENSPTRG00000008782
I
0.811
ENSNLEG00000014526
Nomascus leucogenys
ENSNLEG00000014526
I
0.811
ENSTSYG00000006855
Tarsius syrichta
ENSTSYG00000006855
I
0.811
ZNF18
Callithrix jacchus
ENSCJAG00000004790
I
0.811
ENSSTOG00000012652
Ictidomys tridecemlineatus
ENSSTOG00000012652
I
0.811
ZNF18
Otolemur garnettii
ENSOGAG00000027830
I
0.807
ZNF18
Tupaia belangeri
ENSTBEG00000007103
I
0.806
ZNF18
Microcebus murinus
ENSMICG00000016196
I
0.805
ZNF18
Echinops telfairi
ENSETEG00000000611
I
0.804
ZNF18
Erinaceus europaeus
ENSEEUG00000011943
I
0.803
ZNF18
Homo sapiens
ENSG00000154957
D
0.803
ZNF18
Sorex araneus
ENSSARG00000003073
I
0.802
ZNF18
Pteropus vampyrus
ENSPVAG00000014085
I
0.802
ENSAMEG00000013156
Ailuropoda melanoleuca
ENSAMEG00000013156
I
0.802
ZNF18
Choloepus hoffmanni
ENSCHOG00000001767
I
0.802
ZNF18
Dasypus novemcinctus
ENSDNOG00000036895
I
0.802
ZNF18
Equus caballus
ENSECAG00000025164
I
0.802
ZNF18
Canis familiaris
ENSCAFG00000017843
I
0.802
ENSMPUG00000003670
Mustela putorius furo
ENSMPUG00000003670
I
0.802
ENSP00000391376
Macaca fascicularis
ENSP00000391376
I
0.799
ENSPANG00000023768
Papio anubis
ENSPANG00000023768
I
0.799
ENSCSAG00000009126
Chlorocebus sabaeus
ENSCSAG00000009126
I
0.799
ZNF18
Felis catus
ENSFCAG00000027934
I
0.786