HHAL001434-PA (Halyomorpha halys)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 HHAL001434-PA T165508_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.838 0.838
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.838 0.838
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.838 0.838
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.838 0.838
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.730 0.730
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HHAL001434-PA CSD 23 63

Links

Other CSD family TFs
Other Halyomorpha halys TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Tal_R003478 Tyto alba Tal_R003478 I 0.865
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.865
Cmyd_10002115 Chelonia mydas Cmyd_10002115 I 0.861
ENSMPUG00000013922 Mustela putorius furo ENSMPUG00000013922 I 0.838
Cmyd_10003103 Chelonia mydas Cmyd_10003103 I 0.838
ENSOCUG00000000147 Oryctolagus cuniculus ENSOCUG00000000147 I 0.824
CpipJ_CPIJ002248 Culex pipiens CpipJ_CPIJ002248 I 0.811
Cmyd_10000339 Chelonia mydas Cmyd_10000339 I 0.811
CPIJ002248 Culex quinquefasciatus CPIJ002248 I 0.811
Alligator_sinensis_CCG014301.1 Alligator sinensis Alligator_sinensis_CCG014301.1 I 0.795
CapteG58124 Capitella teleta CapteG58124 I 0.784
ENSOCUG00000024588 Oryctolagus cuniculus ENSOCUG00000024588 I 0.775
ENSMLUG00000029452 Myotis lucifugus ENSMLUG00000029452 I 0.775
CapteG121832 Capitella teleta CapteG121832 I 0.765
ENSOCUG00000021258 Oryctolagus cuniculus ENSOCUG00000021258 I 0.756
CLEC013418 Cimex lectularius CLEC013418 I 0.745
YBX1 Loxodonta africana ENSLAFG00000031170 I 0.744
ENSGGOG00000023840 Gorilla gorilla ENSGGOG00000023840 I 0.743
ENSOCUG00000026608 Oryctolagus cuniculus ENSOCUG00000026608 I 0.725
ENSSHAG00000011350 Sarcophilus harrisii ENSSHAG00000011350 I 0.714
ENSMLUG00000024638 Myotis lucifugus ENSMLUG00000024638 I 0.707
ENSOGAG00000031268 Otolemur garnettii ENSOGAG00000031268 I 0.703
ENSOGAG00000030360 Otolemur garnettii ENSOGAG00000030360 I 0.703
SINV21160 Solenopsis invicta SINV21160 I 0.702