ENSPSIG00000003536 (Pelodiscus sinensis)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		ENSPSIG00000003536 T167235_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CUX2
M02940_2.00 		Homo sapiens
ATCRATAHNNDWATCGAT
ATCGATWHNNDTATYGAT		 SELEX
Jolma et al.(2013)
CUX2_1 		0.709 0.709
CUX2
M02941_2.00 		Homo sapiens
DDATYGATYA
TRATCRATHH		 SELEX
Jolma et al.(2013)
CUX2_2 		0.709 0.709
CUX2
M04665_2.00 		Homo sapiens
NTRATCGATYRN
NYRATCGATYAN		 SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX 		0.709 0.709
CUX2
M04666_2.00 		Homo sapiens
BYRATCGATYRB
VYRATCGATYRV		 SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX 		0.709 0.709
Cux2
M09025_2.00 		Mus musculus
NBBATTGATYD
HRATCAATVVN		 Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000003726 CUT 496 572
ENSPSIP00000003726 CUT 854 929
ENSPSIP00000003726 CUT 1030 1107
ENSPSIP00000003726 Homeodomain 1157 1213
ENSPSIP00000003728 CUT 396 473
ENSPSIP00000003728 CUT 755 830
ENSPSIP00000003728 CUT 931 1008
ENSPSIP00000003728 Homeodomain 1049 1105

Links

Other CUT,Homeodomain family TFs
Other Pelodiscus sinensis TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSMEUG00000004239 Macropus eugenii ENSMEUG00000004239 I 0.767
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I 0.720
CUX2 Gallus gallus ENSGALG00000004598 I 0.718
CUX2 Meleagris gallopavo ENSMGAG00000005225 I 0.718
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I 0.718
CUX2 Myotis lucifugus ENSMLUG00000003239 I 0.715
ENSSHAG00000009458 Sarcophilus harrisii ENSSHAG00000009458 I 0.715
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I 0.715
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I 0.714
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I 0.714
Gfo_R003142 Geospiza fortis Gfo_R003142 I 0.713
CUX2 Monodelphis domestica ENSMODG00000012254 I 0.712
Pvit_05599 Pogona vitticeps Pvit_05599 I 0.712
CUX2 Loxodonta africana ENSLAFG00000001145 I 0.711
Aan_R010335 Calypte anna Aan_R010335 I 0.708
CUX2 Canis familiaris ENSCAFG00000008575 I 0.708
CUX2 Felis catus ENSFCAG00000003176 I 0.708
CUX2 Sus scrofa ENSSSCG00000009831 I 0.704
Ogr05872 Ophisaurus gracilis Ogr05872 I 0.704
ENSP00000261726 Macaca fascicularis ENSP00000261726 I 0.704
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I 0.704
ENSPANG00000011477 Papio anubis ENSPANG00000011477 I 0.704
CUX2 Callithrix jacchus ENSCJAG00000011694 I 0.704
CUX2 Gorilla gorilla ENSGGOG00000012173 I 0.704
CUX2 Homo sapiens ENSG00000111249 D 0.704
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I 0.704
CUX2 Anolis carolinensis ENSACAG00000002281 I 0.704
CUX2 Bos taurus ENSBTAG00000008571 I 0.704
ENSOARG00000017879 Ovis aries ENSOARG00000017879 I 0.704
CUX2 Otolemur garnettii ENSOGAG00000029919 I 0.704
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I 0.702
cux2 Xenopus tropicalis XB-GENE-487236 I 0.701
CUX2 Cavia porcellus ENSCPOG00000020483 I 0.701
CUX2 Tursiops truncatus ENSTTRG00000000945 I 0.701
CUX2 Pteropus vampyrus ENSPVAG00000013176 I 0.700