CRE15310 (Caenorhabditis remanei)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) CRE15310 T174471_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.732 0.732
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.732 0.732
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.732 0.732
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.728 0.728
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.728 0.728
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.723 0.723
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.723 0.723
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE15310 EBF1 19 243

Links

Other EBF1 family TFs
Other Caenorhabditis remanei TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 1.000
CJA00446 Caenorhabditis japonica CJA00446 I 0.972
SINV26263 Solenopsis invicta SINV26263 I 0.958
CBN13270 Caenorhabditis brenneri CBN13270 I 0.942
CBG07590 Caenorhabditis briggsae CBG07590 I 0.915
unc-3 Caenorhabditis elegans WBGene00006743 I 0.905
EBF2 Homo sapiens ENSG00000221818 D 0.898
ENSCSAG00000016068 Chlorocebus sabaeus ENSCSAG00000016068 I 0.898
LLOJ000215 Lutzomyia longipalpis LLOJ000215 I 0.888
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.882
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.882
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.877
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.877
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.875
ENSACAG00000007938 Anolis carolinensis ENSACAG00000007938 I 0.873
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.870
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.865
ENSSTOG00000016352 Ictidomys tridecemlineatus ENSSTOG00000016352 I 0.864
EBF4 Homo sapiens ENSG00000088881 D 0.864
DICVIV_13258 Dictyocaulus viviparus DICVIV_13258 I 0.862
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.861
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.860
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.857
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I 0.851
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.846
EBF3 Gallus gallus ENSGALG00000010461 I 0.845
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.841
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.839
EBF1 Otolemur garnettii ENSOGAG00000013992 I 0.830
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.828
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.825
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.823
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.821
HMEL014948 Heliconius melpomene HMEL014948 I 0.821
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.812
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.812
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.812
ASU_01180 Ascaris suum ASU_01180 I 0.811
HPLM_0000807901 Haemonchus placei HPLM_0000807901 I 0.807
HCOI01630600 Haemonchus contortus HCOI01630600 I 0.807
Ppa-unc-3 Pristionchus pacificus PPA20518 I 0.806
AGAP011437 Anopheles gambiae AGAP011437 I 0.806
ACOM041529 Anopheles coluzzii ACOM041529 I 0.806
L798_15574 Zootermopsis nevadensis L798_15574 I 0.802
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.800
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.800
EBF3 Microcebus murinus ENSMICG00000008536 I 0.800
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.798
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.797
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.797
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.796
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.795
LOAG_18199 Loa loa LOAG_18199 I 0.795
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.795
NECAME_10162 Necator americanus NECAME_10162 I 0.794
SVUK_0001114801 Strongylus vulgaris SVUK_0001114801 I 0.794
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.793
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.791
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.791
Tal_R004164 Tyto alba Tal_R004164 I 0.791
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.791
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.791
ACUA010350 Anopheles culicifacies ACUA010350 I 0.791
ENSTSYG00000019489 Tarsius syrichta ENSTSYG00000019489 I 0.790
ACAC_0000654401 Angiostrongylus cantonensis ACAC_0000654401 I 0.788
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.788
EBF1 Microcebus murinus ENSMICG00000010036 I 0.787
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.784
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.784
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.784
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.783
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.783
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.783
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.783
Bm6296 Brugia malayi Bm6296 I 0.783
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.783
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.778
Aan_R009520 Calypte anna Aan_R009520 I 0.778
MCINX016126 Melitaea cinxia MCINX016126 I 0.775
ACEP22947 Atta cephalotes ACEP22947 I 0.775
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I 0.775
GH12956 Drosophila grimshawi FBgn0120434 I 0.775
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I 0.775
L889_g1820 Steinernema feltiae L889_g1820 I 0.772
L898_g8304 Steinernema monticolum L898_g8304 I 0.772
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.768
EFV50386 Trichinella spiralis EFV50386 I 0.768
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.768
D917_06660 Trichinella nativa D917_06660 I 0.768
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.767
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.767
EBF1 Felis catus ENSFCAG00000008547 I 0.766
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.765
NV10306 Nasonia vitripennis NV10306 I 0.764
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.763
GG22397 Drosophila erecta FBgn0114569 I 0.762
kn Drosophila melanogaster FBgn0001319 D 0.762
GH20479 Drosophila grimshawi FBgn0127942 I 0.762
GM20182 Drosophila sechellia FBgn0175065 I 0.762
GE12286 Drosophila yakuba FBgn0230042 I 0.762
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.761
EBF4 Sus scrofa ENSSSCG00000007171 I 0.759
WBGene00240610 Onchocerca volvulus WBGene00240610 I 0.758
AALB010330 Anopheles albimanus AALB010330 I 0.757
GB42304 Apis mellifera GB42304 I 0.756
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.755
L893_g31120 Steinernema glaseri L893_g31120 I 0.754
AATE014419 Anopheles atroparvus AATE014419 I 0.753
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.751
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.750
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.750
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.750
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.750
EBF1 Equus caballus ENSECAG00000007964 I 0.750
GI21022 Drosophila mojavensis FBgn0143754 I 0.750
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.750
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.747
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.747
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.747
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.746
AMEM017983 Anopheles merus AMEM017983 I 0.743
AMEC016105 Anopheles melas AMEC016105 I 0.743
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.742
AAEL003436 Aedes aegypti AAEL003436 I 0.740
BXY_1639700 Bursaphelenchus xylophilus BXY_1639700 I 0.738
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.733
PHUM119360 Pediculus humanus PHUM119360 I 0.733
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.733
MDOA011385 Musca domestica MDOA011385 I 0.732
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.732
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.732
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.732
ebf3a Oryzias latipes ENSORLG00000005870 I 0.732
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.732
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.732
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.731
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.729
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.728
ebf1a Danio rerio ENSDARG00000099849 I 0.728
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.728
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.728
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.728
GJ21945 Drosophila virilis FBgn0209060 I 0.728
EBF3 Homo sapiens ENSG00000108001 D 0.728
Ebf3 Mus musculus ENSMUSG00000010476 I 0.728
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.728
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.728
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.728
GK23295 Drosophila willistoni FBgn0225257 I 0.728
GL10656 Drosophila persimilis FBgn0148266 I 0.728
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.728
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.728
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.728
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.728
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.728
EBF2 Gallus gallus ENSGALG00000000242 I 0.728
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.728
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.728
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.728
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.728
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.728
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.728
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.728
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.726
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I 0.726
EBF4 Loxodonta africana ENSLAFG00000006892 I 0.726
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.723
LotgiG225788 Lottia gigantea LotgiG225788 I 0.723
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.723
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.723
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.723
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.723
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.723
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.723
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.723
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.723
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.723
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.723
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.723
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.723
EBF2 Sus scrofa ENSSSCG00000009655 I 0.723
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.723
EBF2 Bos taurus ENSBTAG00000040390 I 0.723
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.723
GF11778 Drosophila ananassae FBgn0088818 I 0.723
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.723
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.723
EBF2 Canis familiaris ENSCAFG00000008918 I 0.723
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.723
Aan_R007097 Calypte anna Aan_R007097 I 0.721
EBF1 Macaca mulatta ENSMMUG00000021696 I 0.720
ENSMMUP00000028570 Macaca fascicularis ENSMMUP00000028570 I 0.720
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.720
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.719
ebf2.S Xenopus laevis XB-GENE-971141 I 0.719
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.719
EBF4 Oryzias latipes ENSORLG00000020414 I 0.719
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.719
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.719
ebf1b Danio rerio ENSDARG00000069196 I 0.719
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.714
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.714
KGM_09934 Danaus plexippus KGM_09934 I 0.714
EBF1 Gallus gallus ENSGALG00000003699 I 0.714
Ebf4 Mus musculus ENSMUSG00000053552 D 0.714
TC001270 Tribolium castaneum TC001270 I 0.714
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.714
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.714
D918_06798 Trichuris suis D918_06798 I 0.713
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.712
EBF1 Homo sapiens ENSG00000164330 D 0.710
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.710
EBF1 Echinops telfairi ENSETEG00000011711 I 0.710
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.710
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.710
EBF1 Bos taurus ENSBTAG00000037508 I 0.710
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.710
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.710
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.710
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.710
Ebf1 Mus musculus ENSMUSG00000057098 D 0.710
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.710
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.709
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.708
AARA002865 Anopheles arabiensis AARA002865 I 0.707
AQUA007473 Anopheles quadriannulatus AQUA007473 I 0.707
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.707
EBF2 Equus caballus ENSECAG00000014179 I 0.706
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.706
EBF4 Equus caballus ENSECAG00000010003 I 0.706
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.706
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.706
ebf3a Danio rerio ENSDARG00000100244 I 0.706
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.706
RSKR_0000832900 Rhabditophanes kr3021 RSKR_0000832900 I 0.703
AFUN004907 Anopheles funestus AFUN004907 I 0.703
HelroG112029 Helobdella robusta HelroG112029 I 0.701
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.701
EBF4 Bos taurus ENSBTAG00000037757 I 0.701
ebf3.L Xenopus laevis XB-GENE-962547 I 0.701
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.701
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.701
EBF4 Canis familiaris ENSCAFG00000006631 I 0.701
Ebf2 Mus musculus ENSMUSG00000022053 D 0.701
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.701
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.701
EBF1 Oryzias latipes ENSORLG00000007471 I 0.701
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.701
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.701
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.701
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.701
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.701
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.701
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.701
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.701
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.701
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.701