ebf2.L (Xenopus laevis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) XB-GENE-6252857 T174857_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.939 0.939
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.870 0.870
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.840 0.840
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.840 0.840
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.840 0.840
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.792 0.792
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.788 0.788
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAB96782 EBF1 14 244
AAI70176 EBF1 14 244
B7ZRI2 EBF1 14 244

Links

Other EBF1 family TFs
Other Xenopus laevis TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.987
ebf2.S Xenopus laevis XB-GENE-971141 I 0.978
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.975
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.975
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.975
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.975
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.975
EBF1 Equus caballus ENSECAG00000007964 I 0.975
Aan_R009520 Calypte anna Aan_R009520 I 0.961
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.961
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.944
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.944
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.944
EBF2 Gallus gallus ENSGALG00000000242 I 0.944
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.944
Ebf2 Mus musculus ENSMUSG00000022053 D 0.944
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.944
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.939
EBF2 Homo sapiens ENSG00000221818 D 0.939
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.939
EBF2 Equus caballus ENSECAG00000014179 I 0.939
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.939
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.939
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.939
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.939
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.939
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.939
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.939
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.939
EBF2 Sus scrofa ENSSSCG00000009655 I 0.939
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.939
EBF2 Canis familiaris ENSCAFG00000008918 I 0.939
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.939
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.939
EBF2 Bos taurus ENSBTAG00000040390 I 0.939
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.939
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.936
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.936
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.935
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.935
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.935
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.935
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.931
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.931
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.930
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.930
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.929
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.926
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.923
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.922
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.922
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.922
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.919
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.918
ebf2 Oryzias latipes ENSORLG00000006408 I 0.918
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.914
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.913
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.913
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.913
EBF3 Microcebus murinus ENSMICG00000008536 I 0.913
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.908
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.899
EBF4 Homo sapiens ENSG00000088881 D 0.898
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.888
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.884
ebf2 Danio rerio ENSDARG00000042525 I 0.883
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.874
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.874
Ebf3 Mus musculus ENSMUSG00000010476 I 0.874
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.874
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.874
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.874
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.874
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.874
EBF3 Homo sapiens ENSG00000108001 D 0.874
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.874
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.870
ebf3a Danio rerio ENSDARG00000100244 I 0.870
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.870
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.870
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.870
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.870
EBF2 Felis catus ENSFCAG00000003607 I 0.870
EBF2 Monodelphis domestica ENSMODG00000016702 I 0.866
ebf3.L Xenopus laevis XB-GENE-962547 I 0.866
Aan_R007097 Calypte anna Aan_R007097 I 0.866
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.866
EBF1 Felis catus ENSFCAG00000008547 I 0.863
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.861
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.857
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.857
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.853
EBF4 Oryzias latipes ENSORLG00000020414 I 0.853
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.853
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.848
ebf3a Oryzias latipes ENSORLG00000005870 I 0.848
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.848
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.848
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.848
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.844
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.844
EBF1 Gallus gallus ENSGALG00000003699 I 0.844
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.844
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.844
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.844
EBF1 Homo sapiens ENSG00000164330 D 0.844
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.844
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.844
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.844
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.844
Ebf1 Mus musculus ENSMUSG00000057098 D 0.844
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.844
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.844
EBF1 Echinops telfairi ENSETEG00000011711 I 0.844
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.844
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.844
EBF1 Bos taurus ENSBTAG00000037508 I 0.844
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.840
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.840
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.840
ebf1b Danio rerio ENSDARG00000069196 I 0.840
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.840
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.840
ebf1a Danio rerio ENSDARG00000099849 I 0.840
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.840
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.840
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.836
EBF1 Oryzias latipes ENSORLG00000007471 I 0.836
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.836
EBF1 Oryzias latipes ENSORLG00000002342 I 0.836
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.831
EBF1 Canis familiaris ENSCAFG00000017318 I 0.831
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.831
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.831
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.827
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.827
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.827
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.827
MCINX016126 Melitaea cinxia MCINX016126 I 0.825
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.823
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.823
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.820
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.818
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.817
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.814
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I 0.810
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.810
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.810
AGAP011437 Anopheles gambiae AGAP011437 I 0.806
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.805
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.801
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.801
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.801
GH12956 Drosophila grimshawi FBgn0120434 I 0.800
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.797
EBF4 Bos taurus ENSBTAG00000037757 I 0.797
EBF4 Canis familiaris ENSCAFG00000006631 I 0.797
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.797
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.797
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.797
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.797
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.793
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.793
Ebf4 Mus musculus ENSMUSG00000053552 D 0.792
EBF4 Equus caballus ENSECAG00000010003 I 0.792
ACUA010350 Anopheles culicifacies ACUA010350 I 0.791
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.783
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.779
EBF1 Microcebus murinus ENSMICG00000010036 I 0.775
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.772
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.771
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.771
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.771
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.771
EBF4 Procavia capensis ENSPCAG00000011947 I 0.770
EBF1 Procavia capensis ENSPCAG00000013495 I 0.769
NV10306 Nasonia vitripennis NV10306 I 0.768
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I 0.767
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.762
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.758
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.758
Afo_R002906 Aptenodytes forsteri Afo_R002906 I 0.758
AALB010330 Anopheles albimanus AALB010330 I 0.757
AAEL003436 Aedes aegypti AAEL003436 I 0.753
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.753
CapteG93575 Capitella teleta CapteG93575 I 0.753
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.749
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.749
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.749
EBF4 Felis catus ENSFCAG00000014453 I 0.745
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.745
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.745
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.745
LotgiG225788 Lottia gigantea LotgiG225788 I 0.745
EBF4 Sus scrofa ENSSSCG00000007171 I 0.745
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.745
ASU_01180 Ascaris suum ASU_01180 I 0.743
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I 0.740
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.740
PHUM119360 Pediculus humanus PHUM119360 I 0.736
EFV50386 Trichinella spiralis EFV50386 I 0.736
MDOA011385 Musca domestica MDOA011385 I 0.736
D917_06660 Trichinella nativa D917_06660 I 0.736
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.736
KGM_09934 Danaus plexippus KGM_09934 I 0.736
ebf3b Danio rerio ENSDARG00000091287 I 0.736
TC001270 Tribolium castaneum TC001270 I 0.732
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.730
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.730
EBF3 Echinops telfairi ENSETEG00000014060 I 0.727
GB42304 Apis mellifera GB42304 I 0.727
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.727
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.723
GM20182 Drosophila sechellia FBgn0175065 I 0.723
GE12286 Drosophila yakuba FBgn0230042 I 0.723
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.723
kn Drosophila melanogaster FBgn0001319 D 0.723
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.723
GG22397 Drosophila erecta FBgn0114569 I 0.723
SMAR000842 Strigamia maritima SMAR000842 I 0.722
D918_06798 Trichuris suis D918_06798 I 0.720
GF11778 Drosophila ananassae FBgn0088818 I 0.719
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.719
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.719
GL10656 Drosophila persimilis FBgn0148266 I 0.719
GK23295 Drosophila willistoni FBgn0225257 I 0.719
L798_15574 Zootermopsis nevadensis L798_15574 I 0.719
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.714
GH20479 Drosophila grimshawi FBgn0127942 I 0.714
GJ21945 Drosophila virilis FBgn0209060 I 0.714
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.712
GI21022 Drosophila mojavensis FBgn0143754 I 0.710
L898_g8304 Steinernema monticolum L898_g8304 I 0.710
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.710
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.710
LCUP013861 Lucilia cuprina LCUP013861 I 0.710
L893_g31120 Steinernema glaseri L893_g31120 I 0.710
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.710
L889_g1820 Steinernema feltiae L889_g1820 I 0.710
Bm6296 Brugia malayi Bm6296 I 0.710
LOAG_18199 Loa loa LOAG_18199 I 0.710
ACOM041538 Anopheles coluzzii ACOM041538 I 0.708
AMEM016790 Anopheles merus AMEM016790 I 0.708
unc-3 Caenorhabditis elegans WBGene00006743 I 0.707
CBN13270 Caenorhabditis brenneri CBN13270 I 0.706
CRE15310 Caenorhabditis remanei CRE15310 I 0.706
HelroG112029 Helobdella robusta HelroG112029 I 0.701
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.701