EBF1 (Takifugu rubripes)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSTRUG00000013805 T174715_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.918 0.918
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.918 0.918
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.918 0.918
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.905 0.905
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.866 0.866
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.857 0.857
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.840 0.840
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.736 0.736
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000035276 EBF1 16 246
ENSTRUP00000035277 EBF1 16 246
ENSTRUP00000035278 EBF1 16 246
ENSTRUP00000035279 EBF1 16 246

Links

Other EBF1 family TFs
Other Takifugu rubripes TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.952
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.948
EBF1 Oryzias latipes ENSORLG00000002342 I 0.948
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.944
EBF1 Oryzias latipes ENSORLG00000007471 I 0.944
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.944
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.939
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.939
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.939
ebf1b Danio rerio ENSDARG00000069196 I 0.935
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.935
ebf1a Danio rerio ENSDARG00000099849 I 0.931
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.926
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.922
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.918
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.918
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.918
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.918
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.918
EBF1 Homo sapiens ENSG00000164330 D 0.918
EBF1 Echinops telfairi ENSETEG00000011711 I 0.918
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.918
EBF1 Bos taurus ENSBTAG00000037508 I 0.918
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.918
Ebf1 Mus musculus ENSMUSG00000057098 D 0.918
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.918
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.913
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.913
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.913
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.913
ebf3a Oryzias latipes ENSORLG00000005870 I 0.913
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.913
EBF1 Gallus gallus ENSGALG00000003699 I 0.913
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.913
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.913
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.909
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.909
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.909
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.909
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.905
EBF3 Homo sapiens ENSG00000108001 D 0.905
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.905
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.905
ebf3.L Xenopus laevis XB-GENE-962547 I 0.905
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.905
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.905
Ebf3 Mus musculus ENSMUSG00000010476 I 0.905
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.905
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.905
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.905
EBF1 Canis familiaris ENSCAFG00000017318 I 0.905
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.905
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.905
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.905
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.905
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.905
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.903
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.900
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.900
EBF4 Oryzias latipes ENSORLG00000020414 I 0.900
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.900
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.900
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.900
ebf3a Danio rerio ENSDARG00000100244 I 0.900
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.900
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.900
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.896
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.892
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.892
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I 0.887
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.883
Aan_R007097 Calypte anna Aan_R007097 I 0.883
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.879
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.866
EBF4 Bos taurus ENSBTAG00000037757 I 0.866
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.866
EBF4 Canis familiaris ENSCAFG00000006631 I 0.866
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.866
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.866
EBF4 Homo sapiens ENSG00000088881 D 0.866
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.866
EBF4 Equus caballus ENSECAG00000010003 I 0.861
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.861
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.861
Ebf4 Mus musculus ENSMUSG00000053552 D 0.857
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.857
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.853
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.848
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.844
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.844
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.840
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.840
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.840
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.840
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.840
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.840
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.840
EBF2 Equus caballus ENSECAG00000014179 I 0.840
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.840
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.840
EBF2 Homo sapiens ENSG00000221818 D 0.840
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.840
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.840
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.840
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.840
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.840
EBF2 Bos taurus ENSBTAG00000040390 I 0.840
EBF2 Canis familiaris ENSCAFG00000008918 I 0.840
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.840
EBF2 Gallus gallus ENSGALG00000000242 I 0.840
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.840
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.840
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.840
Ebf2 Mus musculus ENSMUSG00000022053 D 0.840
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.840
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.840
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.840
EBF2 Sus scrofa ENSSSCG00000009655 I 0.840
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.840
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.840
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.836
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.836
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.836
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.836
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.836
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.831
ebf2 Oryzias latipes ENSORLG00000006408 I 0.831
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.831
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.831
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.831
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.827
ebf2.S Xenopus laevis XB-GENE-971141 I 0.827
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.827
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.824
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.823
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.823
EBF1 Microcebus murinus ENSMICG00000010036 I 0.818
EBF1 Felis catus ENSFCAG00000008547 I 0.814
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I 0.810
EBF1 Equus caballus ENSECAG00000007964 I 0.810
EBF4 Felis catus ENSFCAG00000014453 I 0.810
CapteG93575 Capitella teleta CapteG93575 I 0.805
ebf2 Danio rerio ENSDARG00000042525 I 0.805
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.801
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.801
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.797
EBF4 Sus scrofa ENSSSCG00000007171 I 0.797
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.797
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.797
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.794
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.792
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.792
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.792
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.788
LotgiG225788 Lottia gigantea LotgiG225788 I 0.788
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.788
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.784
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.784
Aan_R009520 Calypte anna Aan_R009520 I 0.784
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.779
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.771
PHUM119360 Pediculus humanus PHUM119360 I 0.771
EBF2 Felis catus ENSFCAG00000003607 I 0.771
AAEL003436 Aedes aegypti AAEL003436 I 0.767
TC001270 Tribolium castaneum TC001270 I 0.766
KGM_09934 Danaus plexippus KGM_09934 I 0.766
EBF2 Monodelphis domestica ENSMODG00000016702 I 0.766
Afo_R002906 Aptenodytes forsteri Afo_R002906 I 0.766
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.766
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.762
MDOA011385 Musca domestica MDOA011385 I 0.762
EBF3 Echinops telfairi ENSETEG00000014060 I 0.762
ebf3b Danio rerio ENSDARG00000091287 I 0.762
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.758
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.758
HelroG112029 Helobdella robusta HelroG112029 I 0.749
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.749
L798_15574 Zootermopsis nevadensis L798_15574 I 0.745
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.745
LCUP013861 Lucilia cuprina LCUP013861 I 0.742
NV10306 Nasonia vitripennis NV10306 I 0.740
GG22397 Drosophila erecta FBgn0114569 I 0.736
GM20182 Drosophila sechellia FBgn0175065 I 0.736
GE12286 Drosophila yakuba FBgn0230042 I 0.736
kn Drosophila melanogaster FBgn0001319 D 0.736
GF11778 Drosophila ananassae FBgn0088818 I 0.732
GH20479 Drosophila grimshawi FBgn0127942 I 0.732
GL10656 Drosophila persimilis FBgn0148266 I 0.732
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.732
GK23295 Drosophila willistoni FBgn0225257 I 0.732
GB42304 Apis mellifera GB42304 I 0.732
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.730
D917_06660 Trichinella nativa D917_06660 I 0.727
EFV50386 Trichinella spiralis EFV50386 I 0.727
GJ21945 Drosophila virilis FBgn0209060 I 0.727
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.723
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.723
EBF4 Procavia capensis ENSPCAG00000011947 I 0.723
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.723
AGAP011437 Anopheles gambiae AGAP011437 I 0.723
GI21022 Drosophila mojavensis FBgn0143754 I 0.723
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.719
ASU_01180 Ascaris suum ASU_01180 I 0.719
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.719
LOAG_18199 Loa loa LOAG_18199 I 0.719
Bm6296 Brugia malayi Bm6296 I 0.719
unc-3 Caenorhabditis elegans WBGene00006743 I 0.716
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.714
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.714
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.714
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.710
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.710
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.706
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.706
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.706
WBGene00240610 Onchocerca volvulus WBGene00240610 I 0.706
L889_g1820 Steinernema feltiae L889_g1820 I 0.706
ENSGMOG00000010328 Gadus morhua ENSGMOG00000010328 I 0.706
L898_g8304 Steinernema monticolum L898_g8304 I 0.706
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.706
L893_g31120 Steinernema glaseri L893_g31120 I 0.701