ebf3a (Danio rerio)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSDARG00000100244 T174525_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.983 0.983
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.944 0.944
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.944 0.944
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.944 0.944
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.879 0.879
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.874 0.874
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.870 0.870
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV

BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000137939 EBF1 17 247
ENSDARP00000139406 EBF1 17 247

Links

Other EBF1 family TFs
Other Danio rerio TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 1.000
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 1.000
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 1.000
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 1.000
Pvit_12046 Pogona vitticeps Pvit_12046 I 1.000
EBF1 Equus caballus ENSECAG00000007964 I 1.000
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.991
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.991
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.991
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.991
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.991
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.991
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.987
EBF3 Microcebus murinus ENSMICG00000008536 I 0.987
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.985
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.984
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.983
EBF3 Homo sapiens ENSG00000108001 D 0.983
Ebf3 Mus musculus ENSMUSG00000010476 I 0.983
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.983
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.983
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.983
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.983
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.983
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.983
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.983
Aan_R007097 Calypte anna Aan_R007097 I 0.982
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.980
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.978
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.978
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.978
EBF4 Homo sapiens ENSG00000088881 D 0.975
ebf3.L Xenopus laevis XB-GENE-962547 I 0.974
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.965
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.961
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.957
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.952
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.952
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.952
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.952
ebf3a Oryzias latipes ENSORLG00000005870 I 0.952
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.952
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.952
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.948
EBF1 Echinops telfairi ENSETEG00000011711 I 0.944
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.944
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.944
EBF1 Homo sapiens ENSG00000164330 D 0.944
Ebf1 Mus musculus ENSMUSG00000057098 D 0.944
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.944
EBF1 Bos taurus ENSBTAG00000037508 I 0.944
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.944
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.944
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.944
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.944
EBF1 Felis catus ENSFCAG00000008547 I 0.941
EBF1 Gallus gallus ENSGALG00000003699 I 0.939
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.939
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.939
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.939
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.931
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.931
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.931
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.931
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.931
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.931
EBF1 Canis familiaris ENSCAFG00000017318 I 0.931
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.931
EBF4 Oryzias latipes ENSORLG00000020414 I 0.931
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.928
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.926
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.923
ENSPMAG00000003301 Petromyzon marinus ENSPMAG00000003301 I 0.923
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.923
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.922
ebf1a Danio rerio ENSDARG00000099849 I 0.922
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.918
EBF1 Oryzias latipes ENSORLG00000007471 I 0.918
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.918
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.918
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.918
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.918
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.918
Aan_R009520 Calypte anna Aan_R009520 I 0.916
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.916
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.914
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.913
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.913
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.909
ebf1b Danio rerio ENSDARG00000069196 I 0.909
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.905
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.905
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.905
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.905
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.900
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.891
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.888
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.887
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.886
EBF1 Oryzias latipes ENSORLG00000002342 I 0.883
EBF4 Bos taurus ENSBTAG00000037757 I 0.879
EBF4 Canis familiaris ENSCAFG00000006631 I 0.879
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.879
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.879
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.879
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.879
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.879
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.879
EBF2 Sus scrofa ENSSSCG00000009655 I 0.874
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.874
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.874
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.874
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.874
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.874
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.874
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.874
EBF2 Bos taurus ENSBTAG00000040390 I 0.874
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.874
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.874
EBF2 Canis familiaris ENSCAFG00000008918 I 0.874
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.874
EBF4 Equus caballus ENSECAG00000010003 I 0.874
EBF2 Gallus gallus ENSGALG00000000242 I 0.874
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.874
Ebf4 Mus musculus ENSMUSG00000053552 D 0.874
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.874
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.874
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.874
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.874
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.874
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.874
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.874
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I 0.874
EBF2 Equus caballus ENSECAG00000014179 I 0.874
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.874
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.874
EBF2 Homo sapiens ENSG00000221818 D 0.874
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.870
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.870
Ebf2 Mus musculus ENSMUSG00000022053 D 0.870
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.870
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.866
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.866
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.866
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.866
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.866
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.865
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.861
ebf2.S Xenopus laevis XB-GENE-971141 I 0.861
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.859
EBF4 Procavia capensis ENSPCAG00000011947 I 0.857
ebf2 Oryzias latipes ENSORLG00000006408 I 0.857
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.857
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.857
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.853
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.853
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.853
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.853
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.853
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.848
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.848
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.848
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.848
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.844
EBF1 Microcebus murinus ENSMICG00000010036 I 0.840
Afo_R002906 Aptenodytes forsteri Afo_R002906 I 0.840
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.839
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.837
AGAP011437 Anopheles gambiae AGAP011437 I 0.836
EBF1 Procavia capensis ENSPCAG00000013495 I 0.834
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.833
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.827
EBF3 Echinops telfairi ENSETEG00000014060 I 0.827
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.826
MCINX016126 Melitaea cinxia MCINX016126 I 0.825
GH12956 Drosophila grimshawi FBgn0120434 I 0.825
EBF4 Felis catus ENSFCAG00000014453 I 0.823
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.823
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.822
ACUA010350 Anopheles culicifacies ACUA010350 I 0.821
ebf3b Danio rerio ENSDARG00000091287 I 0.819
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I 0.818
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.818
ebf2 Danio rerio ENSDARG00000042525 I 0.814
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.810
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.810
CapteG93575 Capitella teleta CapteG93575 I 0.810
EBF4 Sus scrofa ENSSSCG00000007171 I 0.810
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.810
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.806
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.805
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.805
EBF2 Monodelphis domestica ENSMODG00000016702 I 0.801
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.801
LotgiG225788 Lottia gigantea LotgiG225788 I 0.801
EBF2 Felis catus ENSFCAG00000003607 I 0.800
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.797
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.792
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.792
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.788
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.788
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I 0.787
TC001270 Tribolium castaneum TC001270 I 0.786
AALB010330 Anopheles albimanus AALB010330 I 0.786
NV10306 Nasonia vitripennis NV10306 I 0.786
AAEL003436 Aedes aegypti AAEL003436 I 0.785
AATE014419 Anopheles atroparvus AATE014419 I 0.781
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.779
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.779
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.779
SMAR000842 Strigamia maritima SMAR000842 I 0.772
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.766
D917_06660 Trichinella nativa D917_06660 I 0.766
EFV50386 Trichinella spiralis EFV50386 I 0.766
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.764
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.762
PHUM119360 Pediculus humanus PHUM119360 I 0.762
ASU_01180 Ascaris suum ASU_01180 I 0.761
MDOA011385 Musca domestica MDOA011385 I 0.758
ENSBTAG00000047164 Bos taurus ENSBTAG00000047164 I 0.756
KGM_09934 Danaus plexippus KGM_09934 I 0.753
kn Drosophila melanogaster FBgn0001319 D 0.747
L798_15574 Zootermopsis nevadensis L798_15574 I 0.745
HelroG112029 Helobdella robusta HelroG112029 I 0.745
ACOM041538 Anopheles coluzzii ACOM041538 I 0.745
AMEM016790 Anopheles merus AMEM016790 I 0.745
D918_06798 Trichuris suis D918_06798 I 0.744
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.744
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.743
GM20182 Drosophila sechellia FBgn0175065 I 0.740
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.740
GG22397 Drosophila erecta FBgn0114569 I 0.740
GE12286 Drosophila yakuba FBgn0230042 I 0.740
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.736
GH20479 Drosophila grimshawi FBgn0127942 I 0.736
GL10656 Drosophila persimilis FBgn0148266 I 0.736
GB42304 Apis mellifera GB42304 I 0.736
GF11778 Drosophila ananassae FBgn0088818 I 0.736
GJ21945 Drosophila virilis FBgn0209060 I 0.736
GK23295 Drosophila willistoni FBgn0225257 I 0.736
Hsal_03265--XP_394171.3_APIME Harpegnathos saltator Hsal_03265--XP_394171.3_APIME I 0.734
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.732
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.732
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.732
LCUP013861 Lucilia cuprina LCUP013861 I 0.731
AARA002866 Anopheles arabiensis AARA002866 I 0.731
LOAG_18199 Loa loa LOAG_18199 I 0.727
Bm6296 Brugia malayi Bm6296 I 0.727
GI21022 Drosophila mojavensis FBgn0143754 I 0.727
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.727
L889_g1820 Steinernema feltiae L889_g1820 I 0.723
L898_g8304 Steinernema monticolum L898_g8304 I 0.723
L893_g31120 Steinernema glaseri L893_g31120 I 0.723
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.723
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.723
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.723
CBN13270 Caenorhabditis brenneri CBN13270 I 0.723
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.723
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.719
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.719
Ogr13832 Ophisaurus gracilis Ogr13832 I 0.714
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.714
unc-3 Caenorhabditis elegans WBGene00006743 I 0.712
WBGene00240610 Onchocerca volvulus WBGene00240610 I 0.710
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.710
SBAD_0000456201 Soboliphyme baturini SBAD_0000456201 I 0.708
WUBG_00630 Wuchereria bancrofti WUBG_00630 I 0.706
DME_0000265301 Dracunculus medinensis DME_0000265301 I 0.706
CRE15310 Caenorhabditis remanei CRE15310 I 0.706
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.703
ENSAPLG00000012647 Anas platyrhynchos ENSAPLG00000012647 I 0.701
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.700