ebf3a (Takifugu rubripes)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSTRUG00000005721 T174712_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.944 0.944
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.909 0.909
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.909 0.909
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.909 0.909
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.870 0.870
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.861 0.861
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.853 0.853
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000013898 EBF1 16 246
ENSTRUP00000013899 EBF1 16 246

Links

Other EBF1 family TFs
Other Takifugu rubripes TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EBF1 Equus caballus ENSECAG00000007964 I 1.000
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 1.000
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 1.000
Pvit_12046 Pogona vitticeps Pvit_12046 I 1.000
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 1.000
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 1.000
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.983
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.983
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.983
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.983
ebf3a Oryzias latipes ENSORLG00000005870 I 0.983
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.982
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.982
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.982
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.982
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.978
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.975
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.967
ebf3a Danio rerio ENSDARG00000100244 I 0.961
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.953
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.952
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.952
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.952
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.952
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.944
Ebf3 Mus musculus ENSMUSG00000010476 I 0.944
EBF3 Homo sapiens ENSG00000108001 D 0.944
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.944
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.944
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.944
ebf3.L Xenopus laevis XB-GENE-962547 I 0.944
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.944
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.944
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.944
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.939
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.939
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.939
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.928
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.928
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.926
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.922
Aan_R007097 Calypte anna Aan_R007097 I 0.922
EBF4 Oryzias latipes ENSORLG00000020414 I 0.922
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.922
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.918
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.918
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.914
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.909
EBF1 Bos taurus ENSBTAG00000037508 I 0.909
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.909
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.909
Ebf1 Mus musculus ENSMUSG00000057098 D 0.909
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.909
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.909
EBF1 Gallus gallus ENSGALG00000003699 I 0.909
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.909
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.909
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.909
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.909
EBF1 Homo sapiens ENSG00000164330 D 0.909
EBF1 Echinops telfairi ENSETEG00000011711 I 0.909
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.906
Aan_R009520 Calypte anna Aan_R009520 I 0.906
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.905
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.905
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.900
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.896
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.896
ebf1a Danio rerio ENSDARG00000099849 I 0.896
EBF1 Canis familiaris ENSCAFG00000017318 I 0.896
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.896
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.896
EBF1 Oryzias latipes ENSORLG00000007471 I 0.896
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.896
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.896
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.896
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.892
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.892
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.892
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.892
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.892
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.892
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.887
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.883
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.883
ebf1b Danio rerio ENSDARG00000069196 I 0.883
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.879
EBF1 Oryzias latipes ENSORLG00000002342 I 0.879
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.876
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.874
EBF4 Bos taurus ENSBTAG00000037757 I 0.870
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.870
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.870
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.870
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.870
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.870
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.870
EBF4 Homo sapiens ENSG00000088881 D 0.870
EBF4 Canis familiaris ENSCAFG00000006631 I 0.870
EBF4 Equus caballus ENSECAG00000010003 I 0.866
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.866
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.866
Ebf4 Mus musculus ENSMUSG00000053552 D 0.861
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.857
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.854
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.853
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.853
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.853
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.853
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.853
EBF2 Sus scrofa ENSSSCG00000009655 I 0.853
EBF2 Bos taurus ENSBTAG00000040390 I 0.853
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.853
EBF2 Canis familiaris ENSCAFG00000008918 I 0.853
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.853
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.853
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.853
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.853
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.853
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.853
Ebf2 Mus musculus ENSMUSG00000022053 D 0.853
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.853
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.853
EBF2 Gallus gallus ENSGALG00000000242 I 0.853
EBF2 Equus caballus ENSECAG00000014179 I 0.853
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.853
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.853
EBF2 Homo sapiens ENSG00000221818 D 0.853
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.853
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.853
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.853
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.848
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.848
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.848
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.848
EBF4 Procavia capensis ENSPCAG00000011947 I 0.847
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.846
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.844
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.844
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.844
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.844
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I 0.844
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.840
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.836
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.836
ebf2.S Xenopus laevis XB-GENE-971141 I 0.836
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.833
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.831
EBF1 Microcebus murinus ENSMICG00000010036 I 0.831
ebf2 Oryzias latipes ENSORLG00000006408 I 0.831
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.831
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.827
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.827
EBF1 Felis catus ENSFCAG00000008547 I 0.827
MCINX016126 Melitaea cinxia MCINX016126 I 0.825
EBF1 Procavia capensis ENSPCAG00000013495 I 0.824
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.823
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.814
EBF4 Felis catus ENSFCAG00000014453 I 0.814
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.814
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.814
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I 0.810
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.810
CapteG93575 Capitella teleta CapteG93575 I 0.810
Afo_R002906 Aptenodytes forsteri Afo_R002906 I 0.805
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.801
ebf2 Danio rerio ENSDARG00000042525 I 0.801
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.801
ebf3b Danio rerio ENSDARG00000091287 I 0.801
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.801
EBF4 Sus scrofa ENSSSCG00000007171 I 0.801
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.797
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.797
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.797
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.797
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.797
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.797
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.794
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.792
EBF3 Echinops telfairi ENSETEG00000014060 I 0.788
EBF2 Felis catus ENSFCAG00000003607 I 0.787
AALB010330 Anopheles albimanus AALB010330 I 0.786
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.784
LotgiG225788 Lottia gigantea LotgiG225788 I 0.784
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.781
EBF2 Monodelphis domestica ENSMODG00000016702 I 0.779
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I 0.777
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.775
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.775
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.771
AAEL003436 Aedes aegypti AAEL003436 I 0.771
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.771
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.771
EFV50386 Trichinella spiralis EFV50386 I 0.771
D917_06660 Trichinella nativa D917_06660 I 0.771
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.765
SMAR000842 Strigamia maritima SMAR000842 I 0.765
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.762
TC001270 Tribolium castaneum TC001270 I 0.758
ASU_01180 Ascaris suum ASU_01180 I 0.757
KGM_09934 Danaus plexippus KGM_09934 I 0.749
PHUM119360 Pediculus humanus PHUM119360 I 0.749
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.746
MDOA011385 Musca domestica MDOA011385 I 0.745
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.740
NV10306 Nasonia vitripennis NV10306 I 0.740
HelroG112029 Helobdella robusta HelroG112029 I 0.736
L798_15574 Zootermopsis nevadensis L798_15574 I 0.736
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.735
GE12286 Drosophila yakuba FBgn0230042 I 0.732
GM20182 Drosophila sechellia FBgn0175065 I 0.732
kn Drosophila melanogaster FBgn0001319 D 0.732
GG22397 Drosophila erecta FBgn0114569 I 0.732
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.727
GK23295 Drosophila willistoni FBgn0225257 I 0.727
GJ21945 Drosophila virilis FBgn0209060 I 0.727
GB42304 Apis mellifera GB42304 I 0.727
GH20479 Drosophila grimshawi FBgn0127942 I 0.727
GL10656 Drosophila persimilis FBgn0148266 I 0.727
GF11778 Drosophila ananassae FBgn0088818 I 0.727
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.723
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.723
LCUP013861 Lucilia cuprina LCUP013861 I 0.720
AGAP011437 Anopheles gambiae AGAP011437 I 0.719
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.719
LOAG_18199 Loa loa LOAG_18199 I 0.719
Bm6296 Brugia malayi Bm6296 I 0.719
GI21022 Drosophila mojavensis FBgn0143754 I 0.719
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.719
L898_g8304 Steinernema monticolum L898_g8304 I 0.714
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.714
L893_g31120 Steinernema glaseri L893_g31120 I 0.714
L889_g1820 Steinernema feltiae L889_g1820 I 0.714
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.710
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.710
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.710
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.710
unc-3 Caenorhabditis elegans WBGene00006743 I 0.707
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.706
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.706
CRE15310 Caenorhabditis remanei CRE15310 I 0.706
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.703
CBN13270 Caenorhabditis brenneri CBN13270 I 0.701