ebf2 (Oryzias latipes)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSORLG00000006408 T174650_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.935 0.935
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.866 0.866
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.836 0.836
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.836 0.836
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.836 0.836
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.801 0.801
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.801 0.801
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000008052 EBF1 17 247

Links

Other EBF1 family TFs
Other Oryzias latipes TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.991
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.987
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.987
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.983
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.978
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.978
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.948
Aan_R009520 Calypte anna Aan_R009520 I 0.946
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.946
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.939
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.939
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.939
EBF2 Sus scrofa ENSSSCG00000009655 I 0.939
EBF2 Bos taurus ENSBTAG00000040390 I 0.939
EBF2 Canis familiaris ENSCAFG00000008918 I 0.939
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.939
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.939
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.939
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.939
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.939
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.939
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.939
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.939
EBF2 Homo sapiens ENSG00000221818 D 0.939
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.939
EBF2 Equus caballus ENSECAG00000014179 I 0.939
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.939
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.935
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.935
EBF2 Gallus gallus ENSGALG00000000242 I 0.935
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.935
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.935
Ebf2 Mus musculus ENSMUSG00000022053 D 0.935
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.935
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.935
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.931
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.931
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.931
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.929
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.926
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.922
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.918
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.918
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.917
ebf2 Danio rerio ENSDARG00000042525 I 0.913
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.909
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.909
ebf2.S Xenopus laevis XB-GENE-971141 I 0.905
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.904
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.904
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.903
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.902
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.900
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.900
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.900
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.900
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.900
EBF1 Equus caballus ENSECAG00000007964 I 0.900
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.900
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.899
EBF4 Homo sapiens ENSG00000088881 D 0.898
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.887
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.870
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.866
Ebf3 Mus musculus ENSMUSG00000010476 I 0.866
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.866
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.866
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.866
EBF3 Homo sapiens ENSG00000108001 D 0.866
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.866
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.866
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.866
EBF2 Felis catus ENSFCAG00000003607 I 0.865
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.861
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.861
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.861
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.861
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.861
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.861
ebf3a Danio rerio ENSDARG00000100244 I 0.857
EBF4 Oryzias latipes ENSORLG00000020414 I 0.857
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.857
EBF2 Monodelphis domestica ENSMODG00000016702 I 0.857
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.855
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.855
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.853
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.853
Aan_R007097 Calypte anna Aan_R007097 I 0.853
ebf3.L Xenopus laevis XB-GENE-962547 I 0.853
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.853
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.848
ebf3a Oryzias latipes ENSORLG00000005870 I 0.844
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.844
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.844
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.844
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.844
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.844
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.840
ebf1b Danio rerio ENSDARG00000069196 I 0.840
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.840
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.840
ebf1a Danio rerio ENSDARG00000099849 I 0.840
EBF1 Oryzias latipes ENSORLG00000007471 I 0.840
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.840
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.836
Ebf1 Mus musculus ENSMUSG00000057098 D 0.836
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.836
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.836
EBF1 Homo sapiens ENSG00000164330 D 0.836
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.836
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.836
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.836
EBF1 Echinops telfairi ENSETEG00000011711 I 0.836
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.836
EBF1 Bos taurus ENSBTAG00000037508 I 0.836
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.836
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.831
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.831
EBF1 Gallus gallus ENSGALG00000003699 I 0.831
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.831
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.831
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.831
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.831
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.831
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.831
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.831
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.827
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.827
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.827
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.827
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.827
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.826
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.824
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.823
EBF1 Canis familiaris ENSCAFG00000017318 I 0.823
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.823
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.823
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.823
EBF1 Oryzias latipes ENSORLG00000002342 I 0.818
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.818
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.810
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I 0.810
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.810
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.805
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.805
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.805
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.805
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.803
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.801
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.801
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.801
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.801
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.801
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.801
EBF4 Bos taurus ENSBTAG00000037757 I 0.801
EBF4 Canis familiaris ENSCAFG00000006631 I 0.801
Ebf4 Mus musculus ENSMUSG00000053552 D 0.801
EBF4 Equus caballus ENSECAG00000010003 I 0.797
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.797
AGAP011437 Anopheles gambiae AGAP011437 I 0.796
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.788
EBF4 Procavia capensis ENSPCAG00000011947 I 0.781
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.779
MCINX016126 Melitaea cinxia MCINX016126 I 0.775
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.775
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.775
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.775
GH12956 Drosophila grimshawi FBgn0120434 I 0.775
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.774
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I 0.772
NV10306 Nasonia vitripennis NV10306 I 0.764
CapteG93575 Capitella teleta CapteG93575 I 0.762
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.762
EBF1 Microcebus murinus ENSMICG00000010036 I 0.762
EBF1 Felis catus ENSFCAG00000008547 I 0.758
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.758
EBF1 Procavia capensis ENSPCAG00000013495 I 0.754
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.753
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I 0.753
EBF4 Sus scrofa ENSSSCG00000007171 I 0.749
LotgiG225788 Lottia gigantea LotgiG225788 I 0.749
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.749
EBF4 Felis catus ENSFCAG00000014453 I 0.749
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.749
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.749
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.749
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.749
AAEL003436 Aedes aegypti AAEL003436 I 0.749
ASU_01180 Ascaris suum ASU_01180 I 0.748
Afo_R002906 Aptenodytes forsteri Afo_R002906 I 0.745
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.745
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.745
AALB010330 Anopheles albimanus AALB010330 I 0.743
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.740
ebf3b Danio rerio ENSDARG00000091287 I 0.740
EFV50386 Trichinella spiralis EFV50386 I 0.740
D917_06660 Trichinella nativa D917_06660 I 0.740
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.740
SMAR000842 Strigamia maritima SMAR000842 I 0.735
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.735
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.732
EBF3 Echinops telfairi ENSETEG00000014060 I 0.732
KGM_09934 Danaus plexippus KGM_09934 I 0.732
MDOA011385 Musca domestica MDOA011385 I 0.732
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.732
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.732
TC001270 Tribolium castaneum TC001270 I 0.732
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.730
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.729
PHUM119360 Pediculus humanus PHUM119360 I 0.723
ACOM041538 Anopheles coluzzii ACOM041538 I 0.721
AMEM016790 Anopheles merus AMEM016790 I 0.721
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.719
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.719
EBF2 Vicugna pacos ENSVPAG00000015422 I 0.718
L798_15574 Zootermopsis nevadensis L798_15574 I 0.714
HelroG112029 Helobdella robusta HelroG112029 I 0.714
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.714
unc-3 Caenorhabditis elegans WBGene00006743 I 0.712
L898_g8304 Steinernema monticolum L898_g8304 I 0.710
Bm6296 Brugia malayi Bm6296 I 0.710
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.710
L893_g31120 Steinernema glaseri L893_g31120 I 0.710
L889_g1820 Steinernema feltiae L889_g1820 I 0.710
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.710
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.710
LOAG_18199 Loa loa LOAG_18199 I 0.710
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.708
GM20182 Drosophila sechellia FBgn0175065 I 0.706
WBGene00240610 Onchocerca volvulus WBGene00240610 I 0.706
GB42304 Apis mellifera GB42304 I 0.706
GE12286 Drosophila yakuba FBgn0230042 I 0.706
GG22397 Drosophila erecta FBgn0114569 I 0.706
kn Drosophila melanogaster FBgn0001319 D 0.706
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.703
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.701
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.701
GF11778 Drosophila ananassae FBgn0088818 I 0.701
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.701
CBN13270 Caenorhabditis brenneri CBN13270 I 0.701
GK23295 Drosophila willistoni FBgn0225257 I 0.701
GL10656 Drosophila persimilis FBgn0148266 I 0.701
EmuJ_001076400 Echinococcus multilocularis EmuJ_001076400 I 0.700