Gorai.004G035300 (Gossypium raimondii)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Gorai.004G035300 T175357_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.809 0.809
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.809 0.809
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.809 0.809
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.702 0.702
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G035300.1 EIN3 36 82

Links

Other EIN3 family TFs
Other Gossypium raimondii TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.894
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.851
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.851
29708.m000185 Ricinus communis 29708.m000185 I 0.830
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.830
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.830
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.809
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.809
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.809
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.809
Cla011250 Citrullus lanatus Cla011250 I 0.809
EIN3 Arabidopsis thaliana AT3G20770 D 0.809
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.787
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.787
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.787
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.787
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.766
mgf018950m Mimulus guttatus mgf018950m I 0.766
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.766
Bra035746 Brassica rapa Bra035746 I 0.766
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.766
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.766
mgf015996m Mimulus guttatus mgf015996m I 0.745
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.745
Pm017009 Prunus mume Pm017009 I 0.745
PK01239.1 Cannabis sativa PK01239.1 I 0.745
PK13351.1 Cannabis sativa PK13351.1 I 0.745
Ca_10236 Cicer arietinum Ca_10236 I 0.745
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.745
Bra023927 Brassica rapa Bra023927 I 0.723
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.723
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.723
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.723
Bo1g108650 Brassica oleracea Bo1g108650 I 0.723
MDP0000212881 Malus domestica MDP0000212881 I 0.723
MDP0000564884 Malus domestica MDP0000564884 I 0.723
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.723
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.723
Pm017011 Prunus mume Pm017011 I 0.702
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.702
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.702
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.702
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.702
MDP0000306498 Malus domestica MDP0000306498 I 0.702
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.702
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.702
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.702
MDP0000202831 Malus domestica MDP0000202831 I 0.702