fgenesh1_pg.C_scaffold_2000170 (Arabidopsis lyrata)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 fgenesh1_pg.C_scaffold_2000170 T200112_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_2000170 GRAS 304 684

Links

Other GRAS family TFs
Other Arabidopsis lyrata TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCL28 Arabidopsis thaliana AT1G63100 N 0.978
Bostr.22157s0011 Boechera stricta Bostr.22157s0011 N 0.978
Carubv10019945m.g Capsella rubella Carubv10019945m.g N 0.973
Cagra.9501s0015 Capsella grandiflora Cagra.9501s0015 N 0.972
Thhalv10023324m.g Eutrema salsugineum Thhalv10023324m.g N 0.943
Bo9g028850 Brassica oleracea Bo9g028850 N 0.853
Bo00795s120 Brassica oleracea Bo00795s120 N 0.850
Bra026999 Brassica rapa Bra026999 N 0.847
Bra027620 Brassica rapa Bra027620 N 0.845
orange1.1g005954m.g Citrus sinensis orange1.1g005954m.g N 0.734
Ciclev10019186m.g Citrus clementina Ciclev10019186m.g N 0.730
30190.m011131 Ricinus communis 30190.m011131 N 0.725
evm.TU.supercontig_74.80 Carica papaya evm.TU.supercontig_74.80 N 0.725
POPTR_0001s08850 Populus trichocarpa POPTR_0001s08850 N 0.721
cassava2243.valid.m1 Manihot esculenta cassava2243.valid.m1 N 0.717
cassava41178.m1 Manihot esculenta cassava41178.m1 N 0.714
TCM_016186 Theobroma cacao TCM_016186 N 0.711
SapurV1A.0507s0230 Salix purpurea SapurV1A.0507s0230 N 0.710
Eucgr.D01917 Eucalyptus grandis Eucgr.D01917 N 0.710
PK26305.1 Cannabis sativa PK26305.1 N 0.710
Pm023754 Prunus mume Pm023754 N 0.710
POPTR_0003s12240 Populus trichocarpa POPTR_0003s12240 N 0.707
Gorai.008G243900 Gossypium raimondii Gorai.008G243900 N 0.707
PRUPE_ppa017030mg Prunus persica PRUPE_ppa017030mg N 0.706
SapurV1A.1081s0090 Salix purpurea SapurV1A.1081s0090 N 0.701
VIT_02s0025g04000 Vitis vinifera VIT_02s0025g04000 N 0.700